RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 EIF4EBP1Q13541 118 aaPredicted RBP4.74□□□□□ -1.65
SSX3-201ENST00000298396 IL18Q14116 193 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 KIR2DS1Q14954 304 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 TMEM30BQ3MIR4 351 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 Q3ZCU0 254 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 TPTE2P1Q5T6R2 138 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 PYHIN1Q6K0P9 492 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 Q6YL49 198 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 OVCH2Q7RTZ1 564 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 ZDHHC22Q8N966 263 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 OR4D10Q8NGI6 311 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 CFHR4Q92496 578 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 GALMQ96C23 342 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 ABHD14BQ96IU4 210 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 ABHD14AQ9BUJ0 271 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 FXYD6Q9H0Q3 95 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 MEGF9Q9H1U4 602 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 RDH8Q9NYR8 311 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 GNG12Q9UBI6 72 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 MGAT4AQ9UM21 535 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 TBL2Q9Y4P3 447 aaKnown RBP4.74□□□□□ -1.65
SSX3-201ENST00000298396 HILPDAQ9Y5L2 63 aa4.74□□□□□ -1.65
SSX3-201ENST00000298396 TRRAPQ9Y4A5 3859 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 FABP12A6NFH5 140 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 DNAJC9-AS1A6NH13 148 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 VGLL3A8MV65 326 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 ZNF736B4DX44 427 aaPredicted RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 ITGB1BP1O14713 200 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 HSD17B6O14756 317 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 IGHV4-59P01825 116 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 CD74P04233 296 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 CD3DP04234 171 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 OR5H8P0DN80 308 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 AADACP22760 399 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 PTBP1P26599 531 aaKnown RBP eCLIP4.73□□□□□ -1.65
SSX3-201ENST00000298396 S100A5P33763 92 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 RCVRNP35243 200 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 IER3P46695 156 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 REG1BP48304 166 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 RAB13P51153 203 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 LINC00205P59089 165 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 BPIFB3P59826 476 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 MRPS15P82914 257 aaKnown RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 ZNF816Q0VGE8 651 aaPredicted RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 KLF9Q13886 244 aaPredicted RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 CDK10Q15131 360 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 SSX2Q16385 188 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 BAK1Q16611 211 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 PLA1AQ53H76 456 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 RPL39P5Q59GN2 51 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 MINOS1Q5TGZ0 78 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 FAAP20Q6NZ36 180 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 FAM131AQ6UXB0 335 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 CCBE1Q6UXH8 406 aaPredicted RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 ZNF833PQ6ZTB9 187 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 CLRN3Q8NCR9 226 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 OR5AP2Q8NGF4 316 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 RTN4IP1Q8WWV3 396 aaPredicted RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 TAF15Q92804 592 aaKnown RBP eCLIP4.73□□□□□ -1.65
SSX3-201ENST00000298396 MRGPRFQ96AM1 343 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 CREB3L1Q96BA8 519 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 DUX5Q96PT3 197 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 MRPL20Q9BYC9 149 aaKnown RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 TINAGL1Q9GZM7 467 aaPredicted RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 MS4A7Q9GZW8 240 aaPredicted RBP4.73□□□□□ -1.65
SSX3-201ENST00000298396 IFT46Q9NQC8 304 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 DPM3Q9P2X0 92 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 RNF150Q9ULK6 438 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 MINOS1-NBL1R4GNA1 71 aa4.73□□□□□ -1.65
SSX3-201ENST00000298396 IGHV1-3A0A0C4DH29 117 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 ANKRD20A5PA0PJZ0 165 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 OR5H14A6NHG9 310 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 FAM90A9PA6NNJ1 464 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 J3QRK9 145 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 TOR1AO14656 332 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 TIMM23O14925 209 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 HSPA12AO43301 675 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 HOXA3O43365 443 aaPredicted RBP4.72□□□□□ -1.65
SSX3-201ENST00000298396 CHST1O43916 411 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 RGS11O94810 467 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 OR8U9P0C7N5 309 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 CT45A6P0DMU7 189 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 CT45A5P0DMU8 189 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 CT45A7P0DMV0 189 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 ZBTB25P24278 435 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 CD24P25063 80 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 HTR1DP28221 377 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 FCGR2CP31995 323 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 DYNLT3P51808 116 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 PRRX1P54821 245 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 SLURP1P55000 103 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 BRWD1-AS2P59051 145 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 ARPC4P59998 168 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 HILS1P60008 231 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 MRPS10P82664 201 aaKnown RBP4.72□□□□□ -1.65
SSX3-201ENST00000298396 SSBP1Q04837 148 aaKnown RBP4.72□□□□□ -1.65
SSX3-201ENST00000298396 DYRK1AQ13627 763 aa4.72□□□□□ -1.65
SSX3-201ENST00000298396 HABP2Q14520 560 aaPredicted RBP4.72□□□□□ -1.65
SSX3-201ENST00000298396 SLC9A3R2Q15599 337 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms