RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 HIST3H2BBQ8N257 126 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 A0A1B0GTQ1 180 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 M0R2Z0 102 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
USP43-201ENST00000285199 SRSF10O75494 262 aaKnown RBP13.46□□□□□ -0.25
USP43-201ENST00000285199 AGFG2O95081 481 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 SUCLG1P53597 346 aaKnown RBP13.46□□□□□ -0.25
USP43-201ENST00000285199 OR1C1Q15619 314 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 TCTEX1D1Q8N7M0 179 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 EDARADDQ8WWZ3 215 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 C14orf144Q96I85 54 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 USF3Q68DE3 2245 aa13.46□□□□□ -0.26
USP43-201ENST00000285199 PLAUP00749 431 aa13.46□□□□□ -0.26
USP43-201ENST00000285199 GCGP01275 180 aa13.46□□□□□ -0.26
USP43-201ENST00000285199 TAS2R45P59539 299 aa13.46□□□□□ -0.26
USP43-201ENST00000285199 TMEM171Q8WVE6 324 aa13.46□□□□□ -0.26
USP43-201ENST00000285199 PRR14LQ5THK1 2151 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 H0Y980 276 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 PHF7Q9BWX1 381 aaPredicted RBP13.45□□□□□ -0.26
USP43-201ENST00000285199 BET1LQ9NYM9 111 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 IGHV5-10-1A0A0J9YXX1 117 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 COX7A2P2O60397 106 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 SLC23A3Q6PIS1 610 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 OIT3Q8WWZ8 545 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 C10orf35Q96D05 121 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 TWSG1Q9GZX9 223 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 CRISPLD2Q9H0B8 497 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 FGF5P12034 268 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 ORM2P19652 201 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 CD1BP29016 333 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 FGF12P61328 243 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 RHOBP62745 196 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 NLRC5Q86WI3 1866 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 WBP1LQ9NX94 342 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 DLL3Q9NYJ7 618 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 LOXL2Q9Y4K0 774 aa13.45□□□□□ -0.26
USP43-201ENST00000285199 IGHV3-21A0A0B4J1V1 117 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 HELTA6NFD8 242 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
USP43-201ENST00000285199 MFAP2P55001 183 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 LHFPL1Q86WI0 220 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 ABHD12Q8N2K0 398 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 LEAP2Q969E1 77 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 DBX1A6NMT0 343 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 RHBDL1O75783 438 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 KBTBD11O94819 623 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 LRRC29Q8WV35 223 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 MRPL13Q9BYD1 178 aaKnown RBP13.44□□□□□ -0.26
USP43-201ENST00000285199 CISD1Q9NZ45 108 aaKnown RBP13.44□□□□□ -0.26
USP43-201ENST00000285199 A0A1W2PRD5 423 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 A0A1W2PRF3 423 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 A0A1W2PRM7 423 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 FBLL1A6NHQ2 334 aaKnown RBP13.44□□□□□ -0.26
USP43-201ENST00000285199 C1orf53Q5VUE5 145 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 STUMQ69YW2 141 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 KDF1Q8NAX2 398 aaPredicted RBP13.44□□□□□ -0.26
USP43-201ENST00000285199 SSBP3Q9BWW4 388 aaPredicted RBP13.44□□□□□ -0.26
USP43-201ENST00000285199 RNF122Q9H9V4 155 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 SDF2L1Q9HCN8 221 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 FOXJ2Q9P0K8 574 aa13.44□□□□□ -0.26
USP43-201ENST00000285199 IGKV1-12A0A0C4DH73 117 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 RAB29O14966 203 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 HAND1O96004 215 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 IGKV1D-12P01611 117 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 ATP5G3P48201 142 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 AARDQ4LEZ3 155 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
USP43-201ENST00000285199 FAM131CQ96AQ9 280 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 MRPL18Q9H0U6 180 aaKnown RBP13.43□□□□□ -0.26
USP43-201ENST00000285199 WNT5BQ9H1J7 359 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 WASHC3Q9Y3C0 194 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 WIPF3A6NGB9 483 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 E9PLN8 166 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 TOX3O15405 576 aaPredicted RBP13.43□□□□□ -0.26
USP43-201ENST00000285199 S1PR2O95136 353 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 COTL1Q14019 142 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 SMIM21Q3B7S5 101 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 COL5A1-AS1Q5SY13 56 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
USP43-201ENST00000285199 IGKV3D-11A0A0A0MRZ8 115 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 VSTM5A8MXK1 200 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 C5orf67F2Z3F1 127 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 HPRT1P00492 218 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 AMBPP02760 352 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 RFPL3SP0C7P2 107 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 UBE2L3P68036 154 aaKnown RBP13.43□□□□□ -0.26
USP43-201ENST00000285199 TFF3Q07654 80 aa13.43□□□□□ -0.26
USP43-201ENST00000285199 IGHV3OR15-7A0A075B7D8 119 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 TFF1P04155 84 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 CEACAM1P13688 526 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 ZNF718Q3SXZ3 478 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 OR5A2Q8NGI9 324 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 RND1Q92730 232 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 HES7Q9BYE0 225 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 COL4A6Q14031 1691 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 OR5B21A6NL26 309 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 M0R1B8 84 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 OR2H2O95918 312 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 ATP6V1FQ16864 119 aa13.42□□□□□ -0.26
USP43-201ENST00000285199 SPATA45Q537H7 98 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms