RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PIPOXQ9P0Z9 390 aa13.29□□□□□ -0.28
SSBP4-213ENST00000602088 ZNF230Q9UIE0 474 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-213ENST00000602088 RAB29O14966 203 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 FABP7O15540 132 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 SMIM18P0DKX4 95 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 TALDO1P37837 337 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 SRSF7Q16629 238 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSBP4-213ENST00000602088 C9orf152Q5JTZ5 239 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 HACD4Q5VWC8 232 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 HIST2H2BDQ6DRA6 164 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 TREML4Q6UXN2 200 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 Q6ZS49 121 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 CROCCP3Q8IVE0 287 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 OR13F1Q8NGS4 319 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 SLC25A38Q96DW6 304 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 RBMXL1Q96E39 390 aaKnown RBP13.28□□□□□ -0.28
SSBP4-213ENST00000602088 ABHD14BQ96IU4 210 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 S1PR3Q99500 378 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 CABLES2Q9BTV7 478 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 MRPL20Q9BYC9 149 aaKnown RBP13.28□□□□□ -0.28
SSBP4-213ENST00000602088 TOLLIPQ9H0E2 274 aa13.28□□□□□ -0.28
SSBP4-213ENST00000602088 TET2Q6N021 2002 aaPredicted RBP13.28□□□□□ -0.28
SSBP4-213ENST00000602088 NCBP2LA6PVI3 153 aaKnown RBP13.27□□□□□ -0.29
SSBP4-213ENST00000602088 GSTP1P09211 210 aaKnown RBP13.27□□□□□ -0.29
SSBP4-213ENST00000602088 GSTT2P0CG29 244 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 GSTT2BP0CG30 244 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 CD28P10747 220 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 DTYMKP23919 212 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 SERPINB10P48595 397 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 ZNF260Q3ZCT1 412 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 IGSF11Q5DX21 431 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 FAM71F2Q6NXP2 309 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 OR8H1Q8NGG4 311 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 MAFIPQ8WZ33 124 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 SPATA2Q9UM82 520 aa13.27□□□□□ -0.29
SSBP4-213ENST00000602088 TRBV6-7A0A0A0MS04 114 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 TMEM235A6NFC5 223 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 BET1O15155 118 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 FBXO24O75426 580 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 DIRAS3O95661 229 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 C2orf68Q2NKX9 166 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 RPL39P5Q59GN2 51 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 CENPVQ7Z7K6 275 aaPredicted RBP13.26□□□□□ -0.29
SSBP4-213ENST00000602088 Q8N9W7 124 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 OR5AU1Q8NGC0 362 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 RDH8Q9NYR8 311 aa13.26□□□□□ -0.29
SSBP4-213ENST00000602088 IGKV1D-8A0A087WSZ0 117 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 A0A0A6YYH2 397 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 A6NJ64 397 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 PROP1O75360 226 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 IGHG2P01859 326 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 CT45A6P0DMU7 189 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 CT45A5P0DMU8 189 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 CT45A7P0DMV0 189 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 F2RL1P55085 397 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 PITPNAQ00169 270 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 PNLIPRP3Q17RR3 467 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 OR10J5Q8NHC4 309 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 NUDCD2Q8WVJ2 157 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 SLC25A46Q96AG3 418 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 PHF21AQ96BD5 680 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 ABCG5Q9H222 651 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 DCSTAMPQ9H295 470 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 LIN7CQ9NUP9 197 aaKnown RBP13.25□□□□□ -0.29
SSBP4-213ENST00000602088 RNF150Q9ULK6 438 aa13.25□□□□□ -0.29
SSBP4-213ENST00000602088 MEGF8Q7Z7M0 2845 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 TRAV18A0A075B6X5 111 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 SSX5O60225 188 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 TSPAN15O95858 294 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 VBP1P61758 197 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 NCS1P62166 190 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 FAM71E2Q8N5Q1 922 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 RITA1Q96K30 269 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 CITED2Q99967 270 aaPredicted RBP13.24□□□□□ -0.29
SSBP4-213ENST00000602088 ST6GALNAC5Q9BVH7 336 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 MMP27Q9H306 513 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 DIABLOQ9NR28 239 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 ZNF221Q9UK13 617 aa13.24□□□□□ -0.29
SSBP4-213ENST00000602088 CSF1P09603 554 aa13.23□□□□□ -0.29
SSBP4-213ENST00000602088 GNG2P59768 71 aa13.23□□□□□ -0.29
SSBP4-213ENST00000602088 ACTBP60709 375 aa13.23□□□□□ -0.29
SSBP4-213ENST00000602088 CD83Q01151 205 aa13.23□□□□□ -0.29
SSBP4-213ENST00000602088 SLC35E3Q7Z769 313 aa13.23□□□□□ -0.29
SSBP4-213ENST00000602088 RASL11BQ9BPW5 248 aa13.23□□□□□ -0.29
SSBP4-213ENST00000602088 MRPS26Q9BYN8 205 aaKnown RBP13.23□□□□□ -0.29
SSBP4-213ENST00000602088 OR5H14A6NHG9 310 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 LINC01548A6NM66 108 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 OR8U9P0C7N5 309 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 MC5RP33032 325 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 GPR12P47775 334 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 MMDQ15546 238 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 TCTEX1D4Q5JR98 221 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 C10orf99Q6UWK7 81 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 FAM131AQ6UXB0 335 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 NDUFA11Q86Y39 141 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 ANKRD13BQ86YJ7 626 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.22□□□□□ -0.29
SSBP4-213ENST00000602088 OR5AN1Q8NGI8 311 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 OR8U1Q8NH10 309 aa13.22□□□□□ -0.29
SSBP4-213ENST00000602088 NOL4LQ96MY1 436 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms