RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 HABP2Q14520 560 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 ACTBL2Q562R1 376 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 C16orf87Q6PH81 154 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 H1FOOQ8IZA3 346 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 LYG1Q8N1E2 194 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 GVQW1Q8N7I0 195 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 ABHD1Q96SE0 405 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 SOSTQ9BQB4 213 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 C11orf54Q9H0W9 315 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 IFI27L2Q9H2X8 130 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 ESM1Q9NQ30 184 aa13.36□□□□□ -0.27
SHKBP1-219ENST00000599575 A0A1W2PPE3 182 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 IGHV4-59P01825 116 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 FAM106CPP0CH98 169 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 PTHLHP12272 177 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 ETV6P41212 452 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 OR3A3P47888 321 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 IL18Q14116 193 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 CDK10Q15131 360 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 PLA1AQ53H76 456 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 SPANXN2Q5MJ10 180 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 ZNF833PQ6ZTB9 187 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 DYNAPQ8N1N2 210 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 SMIM4Q8WVI0 70 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 RTN4IP1Q8WWV3 396 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 SNAPC3Q92966 411 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 TAS2R8Q9NYW2 309 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 MTFP1Q9UDX5 166 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 ZNF221Q9UK13 617 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 OR2W1Q9Y3N9 320 aa13.35□□□□□ -0.27
SHKBP1-219ENST00000599575 H3BUX3 64 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 SLC31A2O15432 143 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 TUSC2O75896 110 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 OR5H8P0DN80 308 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 MSMO1Q15800 293 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 OVCH2Q7RTZ1 564 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 C16orf82Q7Z2V1 217 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 C5orf24Q7Z6I8 188 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 ODF3L1Q8IXM7 274 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 PIFOQ8TCI5 191 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 GIMAP1Q8WWP7 306 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 GCDHQ92947 438 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 BORCS5Q969J3 196 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 AKR1E2Q96JD6 320 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 TCF19Q9Y242 345 aa13.34□□□□□ -0.27
SHKBP1-219ENST00000599575 IGHV1-3A0A0C4DH29 117 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 A0A1W2PPI3 338 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 FAM90A9PA6NNJ1 464 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 ST8SIA5O15466 376 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 GSTZ1O43708 216 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 CD1BP29016 333 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 TAGLNQ01995 201 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 DYRK1AQ13627 763 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 FAM53AQ6NSI3 398 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 DHRS11Q6UWP2 260 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 FAM131AQ6UXB0 335 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 CCDC190Q86UF4 302 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 OR6Q1Q8NGQ2 317 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 OR5H2Q8NGV7 314 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 TMEM158Q8WZ71 300 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 CHIAQ9BZP6 476 aa13.33□□□□□ -0.28
SHKBP1-219ENST00000599575 CUBNO60494 3623 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 SAA2-SAA4A0A096LPE2 208 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 TIMM23O14925 209 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 OR8U9P0C7N5 309 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 SAA2P0DJI9 122 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 MC5RP33032 325 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 GPR12P47775 334 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 LUMP51884 338 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 EBI3Q14213 229 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 VAX1Q5SQQ9 334 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 LYSMD2Q8IV50 215 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 OR8U1Q8NH10 309 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 OR52I2Q8NH67 350 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 CFHR4Q92496 578 aa13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 RBMX2Q9Y388 322 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 RBM7Q9Y580 266 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-219ENST00000599575 MEIS3P1A6NDR6 274 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 A6NDX4 124 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 ZNF736B4DX44 427 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 M0QZK8 103 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 CRYBA1P05813 215 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 CSF1P09603 554 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 TAS2R19P59542 299 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 TMEM229BQ8NBD8 167 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 OR8H1Q8NGG4 311 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 OR6F1Q8NGZ6 308 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 DEDD2Q8WXF8 326 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 ZNF251Q9BRH9 671 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 PARP12Q9H0J9 701 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 EHFQ9NZC4 300 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 KLK11Q9UBX7 282 aa13.31□□□□□ -0.28
SHKBP1-219ENST00000599575 OR5H14A6NHG9 310 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 GPR137BO60478 399 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 NFYAP23511 347 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 FCGR2CP31995 323 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 DIAPH2-AS1Q14236 149 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 MOB3BQ86TA1 216 aa13.3□□□□□ -0.28
SHKBP1-219ENST00000599575 TMEM17Q86X19 198 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms