RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 DVL1O14640 695 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 SNAI2O43623 268 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 FOXH1O75593 365 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 RP2O75695 350 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 ALDOBP05062 364 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 MRPL3P09001 348 aaKnown RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 FBP1P09467 338 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 SLC2A1P11166 492 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 AADACP22760 399 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 CA6P23280 308 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 PAX6P26367 422 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 G0S2P27469 103 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 BDKRB2P30411 391 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 DDOSTP39656 456 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 MDH2P40926 338 aaKnown RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 MNDAP41218 407 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 ALDH3B2P48448 385 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 DVL1P1P54792 670 aaPredicted RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 TMBIM6P55061 237 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 DEFA1P59665 94 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 DEFA3P59666 94 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 ERVFC1-1P60608 527 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 CDC42P60953 191 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 BTG1P62324 171 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 PTGES3Q15185 160 aaKnown RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 C5orf64Q2M2E5 130 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 GLYATL3Q5SZD4 288 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 FAM120AOSQ5T036 256 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 TMEM236Q5W0B7 351 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 DMKNQ6E0U4 476 aaPredicted RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 ACSM5Q6NUN0 579 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 FAHD2BQ6P2I3 314 aaPredicted RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 FAHD1Q6P587 224 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 FAM220AQ7Z4H9 259 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 TMEM179BQ7Z7N9 219 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 APRG1Q8IVJ8 170 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 BOD1L2Q8IYS8 172 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 PARP8Q8N3A8 854 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 FAM89BQ8N5H3 189 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 EIF4E3Q8N5X7 224 aaKnown RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 OR2D3Q8NGH3 330 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 OR2AE1Q8NHA4 323 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 OTOSQ8NHW6 89 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 LGALS14Q8TCE9 139 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 ITLN1Q8WWA0 313 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 ERGIC1Q969X5 290 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 UPRTQ96BW1 309 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 FAHD2AQ96GK7 314 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 CENPNQ96H22 339 aaPredicted RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 GRAMD2BQ96HH9 432 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 REEP6Q96HR9 211 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 MCRIP2Q9BUT9 160 aaKnown RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 GABARAPL1Q9H0R8 117 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 SEMA6AQ9H2E6 1030 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 NIPAL2Q9H841 368 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 PNRC2Q9NPJ4 139 aaKnown RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 TMEM106BQ9NUM4 274 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 NECAP2Q9NVZ3 263 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 DNAJC27Q9NZQ0 273 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 OR5V1Q9UGF6 321 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF221Q9UK13 617 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 SLC22A13Q9Y226 551 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 POLDIP2Q9Y2S7 368 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 TSSC4Q9Y5U2 329 aaPredicted RBP3.85□□□□□ -1.79
ZNF540-204ENST00000586792 AKAP6Q13023 2319 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 SPG11Q96JI7 2443 aa3.85□□□□□ -1.79
ZNF540-204ENST00000586792 ITPR3Q14573 2671 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 TANC2Q9HCD6 1990 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 A0A087WXM4 84 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 IGHV3-64DA0A0J9YX35 117 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 RPS10-NUDT3A0A1W2PQS6 291 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 A0A1W2PRF3 423 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 A0A1W2PRM7 423 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 CD300LBA8K4G0 201 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF670-ZNF695F2Z2N8 137 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 F5H5P2 479 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 M0R036 132 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 SIRPB1O00241 398 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 SULT1C2O00338 296 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 SLC31A2O15432 143 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 FCN3O75636 299 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 TMEM50AO95807 157 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 CYB5R3P00387 301 aaPredicted RBP3.84□□□□□ -1.79
ZNF540-204ENST00000586792 IGHV2-5P01817 119 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 HLA-DPB1P04440 258 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 TFAP2AP05549 437 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 GNAO1P09471 354 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 ANXA3P12429 323 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 ARSBP15848 533 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 DTYMKP23919 212 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 DCKP27707 260 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 HLA-DMAP28067 261 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 HTR2CP28335 458 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 IL2RGP31785 369 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 SOX2P48431 317 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 DAPP51397 102 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF121P58317 390 aaPredicted RBP3.84□□□□□ -1.79
ZNF540-204ENST00000586792 CXCR4P61073 352 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 GNB2P62879 340 aa3.84□□□□□ -1.79
ZNF540-204ENST00000586792 CDK5Q00535 292 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms