RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-215	ENST00000579780	AKR1E2	Q96JD6	320 aa		13.65	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	TBX15	Q96SF7	602 aa		13.65	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	SLC2A9	Q9NRM0	540 aa		13.65	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	HIF1AN	Q9NWT6	349 aa		13.65	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	GAB2	Q9UQC2	676 aa		13.65	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	WNK2	Q9Y3S1	2297 aa		13.65	□□□□□ -0.22
CDK5RAP3-215	ENST00000579780	ODF3B	A8MYP8	253 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	INMT-MINDY4	F8WBC2	141 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	IGLV1-47	P01700	117 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RLN1	P04808	185 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	COX7A1	P24310	79 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	GNRHR	P30968	328 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF134	P52741	427 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF137P	P52743	207 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	UBE2M	P61081	183 aa	Known RBP	13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RND3	P61587	244 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	HCP5	Q6MZN7	132 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	FAM71F2	Q6NXP2	309 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF818P	Q6ZRF7	136 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	CCDC71L	Q8N9Z2	235 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	BVES	Q8NE79	360 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	CCL28	Q9NRJ3	127 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PIPOX	Q9P0Z9	390 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	FLVCR2	Q9UPI3	526 aa		13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.64	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RAB29	O14966	203 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PRAF2	O60831	178 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	IGLV2-14	P01704	120 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	IGHV3-7	P01780	117 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF16	P17020	682 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	IL3RA	P26951	378 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	S100G	P29377	79 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	GPR12	P47775	334 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	HLA-DRB5	Q30154	266 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ABCA11P	Q4W5N1	156 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF626	Q68DY1	528 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TMED4	Q7Z7H5	227 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	CMTM1	Q8IZ96	169 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PNKD	Q8N490	385 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	DRAM1	Q8N682	238 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	FAHD2A	Q96GK7	314 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	C5orf30	Q96GV9	206 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PCGF1	Q9BSM1	259 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ALX4	Q9H161	411 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF221	Q9UK13	617 aa		13.63	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	SAA2-SAA4	A0A096LPE2	208 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780		A0A1W2PPE3	182 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RNASEK-C17orf49	H0YIS7	233 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TOR1A	O14656	332 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	HSD17B6	O14756	317 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	SAA2	P0DJI9	122 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PI3	P19957	117 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PRRX1	P54821	245 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	DLX1	P56177	255 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PIGP	P57054	158 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	KLRD1	Q13241	179 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	CYB5R2	Q6BCY4	276 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	SLC25A42	Q86VD7	318 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ODF3L1	Q8IXM7	274 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	LYG1	Q8N1E2	194 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	OR4P4	Q8NGL7	312 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	OR10X1	Q8NGY0	326 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TMEM230	Q96A57	120 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ABHD14B	Q96IU4	210 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	SDHAF2	Q9NX18	166 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ITGB1BP2	Q9UKP3	347 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	AUP1	Q9Y679	476 aa		13.62	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	DHFR	P00374	187 aa		13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ANXA7	P20073	488 aa	Known RBP	13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	DHODH	Q02127	395 aa		13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	PHLDA2	Q53GA4	152 aa		13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TMEM128	Q5BJH2	165 aa		13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780		Q6ZNX1	250 aa		13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF833P	Q6ZTB9	187 aa		13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	CIART	Q8N365	385 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RNF150	Q9ULK6	438 aa		13.61	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	MYO9A	B2RTY4	2548 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	CRYM-AS1	A6NIL9	109 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RNF212B	A8MTL3	300 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	FLNB	O75369	2602 aa	Known RBP	13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TGFA	P01135	160 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ARG1	P05089	322 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	IL5	P05113	134 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	UBE2E1	P51965	193 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	NOTCH2	Q04721	2471 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	C11orf88	Q6PI97	169 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF66	Q6ZN08	573 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ADAD2	Q8NCV1	583 aa	Known RBP	13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	S1PR3	Q99500	378 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	HSD17B10	Q99714	261 aa	Known RBP	13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNF251	Q9BRH9	671 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	C7orf69	Q9H7B7	122 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	NAA60	Q9H7X0	242 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	ZNRD1	Q9P1U0	126 aa		13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	FLNA	P21333	2647 aa	Known RBP	13.6	□□□□□ -0.23
CDK5RAP3-215	ENST00000579780	TRAV40	A0A0B4J280	105 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms