RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 CABLES2Q9BTV7 478 aa17.68■□□□□ 0.42
SMARCD2-206ENST00000577990 A0A0A6YYH2 397 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 A6NJ64 397 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 GSTT2P0CG29 244 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 GSTT2BP0CG30 244 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 VDAC2P45880 294 aaPredicted RBP17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 OR3A3P47888 321 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 PNLIPRP3Q17RR3 467 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 FAM71F2Q6NXP2 309 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 Q6ZS49 121 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 ANKRD13BQ86YJ7 626 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 SLC25A46Q96AG3 418 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 MRPL20Q9BYC9 149 aaKnown RBP17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 C11orf54Q9H0W9 315 aaPredicted RBP17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 PIPOXQ9P0Z9 390 aa17.67■□□□□ 0.42
SMARCD2-206ENST00000577990 ZNF736B4DX44 427 aaPredicted RBP17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 RAB29O14966 203 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 GABARAPO95166 117 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 DIRAS3O95661 229 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 VSIG10L2P0DP72 767 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 ALDH3B2P48448 385 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 GNG2P59768 71 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 PITPNAQ00169 270 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 LSAMPQ13449 338 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 TMEM95Q3KNT9 176 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 Q8N6K4 173 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 NUDCD2Q8WVJ2 157 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 NAA50Q9GZZ1 169 aaKnown RBP17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 NOTCH1P46531 2555 aa17.66■□□□□ 0.42
SMARCD2-206ENST00000577990 TRAV18A0A075B6X5 111 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 SH2D7A6NKC9 451 aaPredicted RBP17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 BET1O15155 118 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 FGF16O43320 207 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 WIPF1O43516 503 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 MOSP00540 346 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 TFAP2AP05549 437 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 IGSF11Q5DX21 431 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 TREML4Q6UXN2 200 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 GPR141Q7Z602 305 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 C5orf56Q8N8D9 126 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 ABHD14BQ96IU4 210 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 S1PR3Q99500 378 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 NABP2Q9BQ15 211 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 AGMATQ9BSE5 352 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 TOLLIPQ9H0E2 274 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 GHITMQ9H3K2 345 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 DIABLOQ9NR28 239 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 RDH8Q9NYR8 311 aa17.65■□□□□ 0.42
SMARCD2-206ENST00000577990 TRBV6-7A0A0A0MS04 114 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 PEX14O75381 377 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 CTF1Q16619 201 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 C9orf152Q5JTZ5 239 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 UBE2NLQ5JXB2 153 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 GPR107Q5VW38 600 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 OR10J5Q8NHC4 309 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 KCTD12Q96CX2 325 aaKnown RBP17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 ZNF251Q9BRH9 671 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 WNT10AQ9GZT5 417 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 ABCG5Q9H222 651 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 DCSTAMPQ9H295 470 aa17.64■□□□□ 0.41
SMARCD2-206ENST00000577990 IGKV1D-8A0A087WSZ0 117 aa17.63■□□□□ 0.41
SMARCD2-206ENST00000577990 RPL39P5Q59GN2 51 aa17.63■□□□□ 0.41
SMARCD2-206ENST00000577990 ST6GALNAC5Q9BVH7 336 aa17.63■□□□□ 0.41
SMARCD2-206ENST00000577990 NCBP2LA6PVI3 153 aaKnown RBP17.62■□□□□ 0.41
SMARCD2-206ENST00000577990 SSX5O60225 188 aa17.62■□□□□ 0.41
SMARCD2-206ENST00000577990 SAMD12Q8N8I0 201 aa17.62■□□□□ 0.41
SMARCD2-206ENST00000577990 OR8H1Q8NGG4 311 aa17.62■□□□□ 0.41
SMARCD2-206ENST00000577990 GINS4Q9BRT9 223 aa17.62■□□□□ 0.41
SMARCD2-206ENST00000577990 ZNF221Q9UK13 617 aa17.62■□□□□ 0.41
SMARCD2-206ENST00000577990 RNF150Q9ULK6 438 aa17.62■□□□□ 0.41
SMARCD2-206ENST00000577990 WIPF2Q8TF74 440 aaPredicted RBP17.61■□□□□ 0.41
SMARCD2-206ENST00000577990 RBMXL1Q96E39 390 aaKnown RBP17.61■□□□□ 0.41
SMARCD2-206ENST00000577990 S100A16Q96FQ6 103 aaKnown RBP17.61■□□□□ 0.41
SMARCD2-206ENST00000577990 AUNIPQ9H7T9 357 aa17.61■□□□□ 0.41
SMARCD2-206ENST00000577990 M0QZ24 198 aa17.6■□□□□ 0.41
SMARCD2-206ENST00000577990 KCNAB3O43448 404 aa17.6■□□□□ 0.41
SMARCD2-206ENST00000577990 XRCC3O43542 346 aa17.6■□□□□ 0.41
SMARCD2-206ENST00000577990 GPR12P47775 334 aa17.6■□□□□ 0.41
SMARCD2-206ENST00000577990 C11orf44Q8N8P7 122 aa17.6■□□□□ 0.41
SMARCD2-206ENST00000577990 Q8N9W7 124 aa17.6■□□□□ 0.41
SMARCD2-206ENST00000577990 PLSCR3Q9NRY6 295 aa17.6■□□□□ 0.41
SMARCD2-206ENST00000577990 TET2Q6N021 2002 aaPredicted RBP17.6■□□□□ 0.41
SMARCD2-206ENST00000577990 FBXO24O75426 580 aa17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 CT45A6P0DMU7 189 aa17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 CT45A5P0DMU8 189 aa17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 CT45A7P0DMV0 189 aa17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 RORCP51449 518 aa17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 FAM131AQ6UXB0 335 aa17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 H1FOOQ8IZA3 346 aaPredicted RBP17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 ACOT12Q8WYK0 555 aa17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 LIN7CQ9NUP9 197 aaKnown RBP17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 COMMD3Q9UBI1 195 aa17.59■□□□□ 0.41
SMARCD2-206ENST00000577990 OR5H14A6NHG9 310 aa17.58■□□□□ 0.4
SMARCD2-206ENST00000577990 CTXN2P0C2S0 81 aa17.58■□□□□ 0.4
SMARCD2-206ENST00000577990 OR8U9P0C7N5 309 aa17.58■□□□□ 0.4
SMARCD2-206ENST00000577990 F2RL1P55085 397 aa17.58■□□□□ 0.4
SMARCD2-206ENST00000577990 CNIH2Q6PI25 160 aa17.58■□□□□ 0.4
SMARCD2-206ENST00000577990 GLDNQ6ZMI3 551 aaPredicted RBP17.58■□□□□ 0.4
SMARCD2-206ENST00000577990 OR8U1Q8NH10 309 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms