RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 LINC00311Q8N616 119 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 DRAM1Q8N682 238 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.08□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF439Q8NDP4 499 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 CLDND2Q8NHS1 167 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF596Q8TC21 504 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 TNFRSF14Q92956 283 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 BPESC1Q9GZL8 116 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 OR2D2Q9H210 308 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 FAM212BQ9NTI7 297 aaPredicted RBP7.08□□□□□ -1.28
TRAF3-209ENST00000560463 LIN7CQ9NUP9 197 aaKnown RBP7.08□□□□□ -1.28
TRAF3-209ENST00000560463 PIPOXQ9P0Z9 390 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 POLR3KQ9Y2Y1 108 aaPredicted RBP7.08□□□□□ -1.28
TRAF3-209ENST00000560463 ITPR2Q14571 2701 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 C3orf85A0A1B0GTC6 90 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 MEX3AA1L020 520 aaKnown RBP7.07□□□□□ -1.28
TRAF3-209ENST00000560463 H0Y980 276 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 RAB29O14966 203 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 FOXH1O75593 365 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 PGLYRP1O75594 196 aaPredicted RBP7.07□□□□□ -1.28
TRAF3-209ENST00000560463 IGLV2-14P01704 120 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 IGHV1-8P0DP01 117 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 CCL3L1P16619 93 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 F2RP25116 425 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 GPR12P47775 334 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 CATR1Q13166 79 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 TMEM187Q14656 261 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 FCN2Q15485 313 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 PRAMEF5Q5TYX0 476 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF66Q6ZN08 573 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 SLC25A48Q6ZT89 311 aaKnown RBP7.07□□□□□ -1.28
TRAF3-209ENST00000560463 KIR3DL3Q8N743 410 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 LRTM2Q8N967 370 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 CASTOR1Q8WTX7 329 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 MBD6Q96DN6 1003 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 PERPQ96FX8 193 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 ST6GAL2Q96JF0 529 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 HSD17B10Q99714 261 aaKnown RBP7.07□□□□□ -1.28
TRAF3-209ENST00000560463 ABHD14AQ9BUJ0 271 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF436Q9C0F3 470 aaPredicted RBP7.07□□□□□ -1.28
TRAF3-209ENST00000560463 TMEM222Q9H0R3 208 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 TMEM133Q9H2Q1 129 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 NARFLQ9H6Q4 476 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 RAB18Q9NP72 206 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 KCNS2Q9ULS6 477 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 PSG11Q9UQ72 335 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 SESN1Q9Y6P5 492 aa7.07□□□□□ -1.28
TRAF3-209ENST00000560463 PRRC2AP48634 2157 aaKnown RBP7.07□□□□□ -1.28
TRAF3-209ENST00000560463 DUXBA0A1W2PPF3 345 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 C22orf46C9J442 243 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 ST8SIA5O15466 376 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 PHF1O43189 567 aaPredicted RBP7.06□□□□□ -1.28
TRAF3-209ENST00000560463 ENSAO43768 121 aaKnown RBP7.06□□□□□ -1.28
TRAF3-209ENST00000560463 MMP23AO75900 390 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 OR2A4O95047 310 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 CDS2O95674 445 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 OR5AC1P0C628 307 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 RPA2P15927 270 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 CXCL3P19876 107 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 UCP1P25874 307 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 ZNF134P52741 427 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 PRRX1P54821 245 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 ERVFRD-1P60508 538 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 EIF4EBP1Q13541 118 aaPredicted RBP7.06□□□□□ -1.28
TRAF3-209ENST00000560463 SLC9A3R2Q15599 337 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 CLEC12BQ2HXU8 276 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 DEFB113Q30KQ7 82 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 CT45A1Q5HYN5 189 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 FAM71F2Q6NXP2 309 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 LIAT1Q6ZQX7 453 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 TCTE3Q8IZS6 198 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 LGI3Q8N145 548 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 C11orf42Q8N5U0 333 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 UXS1Q8NBZ7 420 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 OR11H7Q8NGC8 314 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 OR5M8Q8NGP6 311 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 OR9G1Q8NH87 305 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 CT45A3Q8NHU0 189 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 GLYATL2Q8WU03 294 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 NRGNQ92686 78 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 IL22RA2Q969J5 263 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 ABHD14BQ96IU4 210 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 TMEM56Q96MV1 263 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 OR2A7Q96R45 310 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 S1PR3Q99500 378 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 PARP12Q9H0J9 701 aaKnown RBP7.06□□□□□ -1.28
TRAF3-209ENST00000560463 SDHAF2Q9NX18 166 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 MGAT4CQ9UBM8 478 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 RNF150Q9ULK6 438 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 TMEM56-RWDD3S4R434 201 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 TNCP24821 2201 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 NAV2Q8IVL1 2488 aa7.06□□□□□ -1.28
TRAF3-209ENST00000560463 KIAA1324LA8MWY0 1029 aaPredicted RBP7.05□□□□□ -1.28
TRAF3-209ENST00000560463 J3QR06 171 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 TOR1AO14656 332 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 IFNA21P01568 189 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 GIPP09681 153 aaPredicted RBP7.05□□□□□ -1.28
TRAF3-209ENST00000560463 KRTAP10-9P60411 292 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 RAP2BP61225 183 aa7.05□□□□□ -1.28
TRAF3-209ENST00000560463 CYCSP99999 105 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms