RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 HTR1DP28221 377 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 REG1BP48304 166 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 PPP5CP53041 499 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 HERV-K104P61576 105 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 SSX2Q16385 188 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 DEFB112Q30KQ8 113 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 Q3ZCU0 254 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 MIDNQ504T8 468 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 RPL39P5Q59GN2 51 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 LY6G6FQ5SQ64 297 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 TMEM17Q86X19 198 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 ODF3L1Q8IXM7 274 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 TEX29Q8N6K0 151 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 SECTM1Q8WVN6 248 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 TOMM40LQ969M1 308 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 AJUBAQ96IF1 538 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 TSC22D3Q99576 134 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 TOLLIPQ9H0E2 274 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 FXYD6Q9H0Q3 95 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 OR2D2Q9H210 308 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 IFI27L2Q9H2X8 130 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 TAS2R8Q9NYW2 309 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
CD44-224ENST00000526669 TBL2Q9Y4P3 447 aaKnown RBP11.11□□□□□ -0.63
CD44-224ENST00000526669 SAA2-SAA4A0A096LPE2 208 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 TUSC2O75896 110 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 PPYP01298 95 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 ZNF735P0CB33 412 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 SAA2P0DJI9 122 aaPredicted RBP11.1□□□□□ -0.63
CD44-224ENST00000526669 IL3RAP26951 378 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 GPR12P47775 334 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 RAB7AP51149 207 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 LUMP51884 338 aaPredicted RBP11.1□□□□□ -0.63
CD44-224ENST00000526669 SCGB2B2Q4G0G5 96 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 VAX1Q5SQQ9 334 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 TPTE2P1Q5T6R2 138 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 C8orf31Q8N9H6 132 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 RPEQ96AT9 228 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 RBMXL1Q96E39 390 aaKnown RBP11.1□□□□□ -0.63
CD44-224ENST00000526669 C5orf30Q96GV9 206 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 ZNF48Q96MX3 618 aaPredicted RBP11.1□□□□□ -0.63
CD44-224ENST00000526669 HRASLSQ9HDD0 168 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 MCUBQ9NWR8 336 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 DPM3Q9P2X0 92 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 FAM96BQ9Y3D0 163 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
CD44-224ENST00000526669 OR5H14A6NHG9 310 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 LEUTXA8MZ59 168 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 DISC1C4P0D8 188 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 ITGB1BP1O14713 200 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 HSD17B6O14756 317 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 MEF2DQ14814 521 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
CD44-224ENST00000526669 OR6F1Q8NGZ6 308 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 GIMAP1Q8WWP7 306 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 AGMATQ9BSE5 352 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 CCDC32Q9BV29 185 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 SLC5A7Q9GZV3 580 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 CCL28Q9NRJ3 127 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 ZNF107Q9UII5 783 aaPredicted RBP11.09□□□□□ -0.63
CD44-224ENST00000526669 ZNF221Q9UK13 617 aa11.09□□□□□ -0.63
CD44-224ENST00000526669 CUBNO60494 3623 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 LY6LH3BQJ8 138 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 CRLF1O75462 422 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 FBP1P09467 338 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 TBPP20226 339 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 CEACAM3P40198 252 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 AP3S2P59780 193 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 BPIFB3P59826 476 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 DHRS11Q6UWP2 260 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 C9orf139Q6ZV77 190 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 SIGLECL1Q8N7X8 197 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 OR51S1Q8NGJ8 323 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 ZDHHC16Q969W1 377 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 MOB3AQ96BX8 217 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 MRPL20Q9BYC9 149 aaKnown RBP11.08□□□□□ -0.64
CD44-224ENST00000526669 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 TNFRSF19Q9NS68 423 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 SDHAF2Q9NX18 166 aa11.08□□□□□ -0.64
CD44-224ENST00000526669 IGHV3-72A0A0B4J1Y9 119 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 A0A1W2PPI3 338 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 M0R1X1 148 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 RAB29O14966 203 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 PGAM2P15259 253 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 FAUP35544 74 aaKnown RBP11.07□□□□□ -0.64
CD44-224ENST00000526669 RAB13P51153 203 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 LINC00205P59089 165 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 BAMBIQ13145 260 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 GLDNQ6ZMI3 551 aaPredicted RBP11.07□□□□□ -0.64
CD44-224ENST00000526669 MOB3BQ86TA1 216 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 TGIF2LXQ8IUE1 241 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 ARRDC1Q8N5I2 433 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 RTN4IP1Q8WWV3 396 aaPredicted RBP11.07□□□□□ -0.64
CD44-224ENST00000526669 ST6GALNAC6Q969X2 333 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 MALSU1Q96EH3 234 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 GPHA2Q96T91 129 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 S1PR3Q99500 378 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 ZNF251Q9BRH9 671 aa11.07□□□□□ -0.64
CD44-224ENST00000526669 PIPOXQ9P0Z9 390 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms