RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 YPEL1O60688 119 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 CA2P00918 260 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 CD81P60033 236 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 ZNF562Q6V9R5 426 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 DEFB125Q8N687 156 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 OR2AK2Q8NG84 335 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 DDB2Q92466 427 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 YPEL2Q96QA6 119 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 WFDC10AQ9H1F0 79 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 IFI27L2Q9H2X8 130 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 BANF2Q9H503 90 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 AMBNQ9NP70 447 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 MBNL3Q9NUK0 354 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 AP4S1Q9Y587 144 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 KMT2AQ03164 3969 aa15.4■□□□□ 0.06
SQSTM1-215ENST00000514093 DNAH10Q8IVF4 4471 aa15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 H7C2Y5 167 aa15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 TRBV12-3P01733 135 aa15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 HTD2P86397 168 aa15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 MRPL28Q13084 256 aaKnown RBP15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 XAF1Q6GPH4 301 aa15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 POC5Q8NA72 575 aa15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 GRPEL2Q8TAA5 225 aa15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 MRPL30Q8TCC3 161 aaKnown RBP15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 SLC7A6OSQ96CW6 309 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 MYCBPQ99417 103 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 NEURL2Q9BR09 285 aa15.39■□□□□ 0.05
SQSTM1-215ENST00000514093 SC5DO75845 299 aa15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 DYRK1AQ13627 763 aa15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 GPR176Q14439 515 aa15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 PSG5Q15238 335 aa15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 ZIK1Q3SY52 487 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 GLIPR1L1Q6UWM5 242 aa15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 OR13C5Q8NGS8 318 aa15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 MUL1Q969V5 352 aa15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 ST6GALNAC5Q9BVH7 336 aa15.38■□□□□ 0.05
SQSTM1-215ENST00000514093 H0YJW9 148 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 TPPPO94811 219 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 BAG2O95816 211 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 CD7P09564 240 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 RIPK1Q13546 671 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 PMS2P11Q13670 270 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 DMKNQ6E0U4 476 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 SIGIRRQ6IA17 410 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 RPP25LQ8N5L8 163 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 GALMQ96C23 342 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 SELENOIQ9C0D9 397 aa15.37■□□□□ 0.05
SQSTM1-215ENST00000514093 A0A0G2JLM5 398 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 OR5H14A6NHG9 310 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 SNTNA6NMZ2 147 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 CA11O75493 328 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 CNIH1O95406 144 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 FUT3P21217 361 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 FXYD3Q14802 87 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 IL1F10Q8WWZ1 152 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 ABHD14BQ96IU4 210 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 PARP12Q9H0J9 701 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 SRD5A3Q9H8P0 318 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 FAM53CQ9NYF3 392 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 PIPOXQ9P0Z9 390 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 PEF1Q9UBV8 284 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 WASHC3Q9Y3C0 194 aa15.36■□□□□ 0.05
SQSTM1-215ENST00000514093 MC5RP33032 325 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 MECP2P51608 486 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 ALDH3A2P51648 485 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 TATDN3Q17R31 274 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 MOGAT2Q3SYC2 334 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 LY6G6FQ5SQ64 297 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 FAM71F2Q6NXP2 309 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 JAGN1Q8N5M9 183 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 DRAXINQ8NBI3 349 aaPredicted RBP15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 OR52I1Q8NGK6 324 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 SIGLEC8Q9NYZ4 499 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 GMPPBQ9Y5P6 360 aa15.35■□□□□ 0.05
SQSTM1-215ENST00000514093 TRAV8-7A0A075B6U6 113 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 CXorf65A6NEN9 183 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 ZNF785A8K8V0 405 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 RAB29O14966 203 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 SLC22A1O15245 554 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 MGMTP16455 207 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 IGFBP3P17936 291 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 LINC00205P59089 165 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 RPEL1Q2QD12 228 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 CD300EQ496F6 205 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 RPL22L1Q6P5R6 122 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 ZNF554Q86TJ5 538 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 CENPNQ96H22 339 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 SLC23A1Q9UHI7 598 aa15.34■□□□□ 0.05
SQSTM1-215ENST00000514093 OR11H12B2RN74 326 aa15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 CRTAPO75718 401 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 RBBP9O75884 186 aa15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 FCGR1AP12314 374 aa15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 GABRB1P18505 474 aa15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 AWAT2Q6E213 333 aa15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 OR5AN1Q8NGI8 311 aa15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 SLC2A8Q9NY64 477 aa15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 STEAP1Q9UHE8 339 aa15.33■□□□□ 0.04
SQSTM1-215ENST00000514093 KIAA1109Q2LD37 5005 aa15.32■□□□□ 0.04
SQSTM1-215ENST00000514093 A0A1W2PPK0 400 aa15.32■□□□□ 0.04
SQSTM1-215ENST00000514093 H3BUA1 57 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms