RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ZNF860A6NHJ4 632 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 HHLA1C9JL84 531 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC31A1O15431 190 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SPRY1O43609 319 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CD5LO43866 347 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF354AO60765 605 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 VENTXO95231 258 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CLDN1O95832 211 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 APOA2P02652 100 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ORM1P02763 201 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 EIF4EP06730 217 aaKnown RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SERPINE2P07093 398 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CXCL1P09341 107 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 RAB40ALP0C0E4 278 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ANKRD34CP0C6C1 535 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 AKAIN1P0CW23 69 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 PGA4P0DJD7 388 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 PGA5P0DJD9 388 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 IGLC2P0DOY2 106 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 IGLC3P0DOY3 106 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 HIST1H1DP16402 221 aaKnown RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 GNB3P16520 340 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 TSPOP30536 169 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CX3CR1P49238 355 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ASCL1P50553 236 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 DUSP3P51452 185 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CNN1P51911 297 aaKnown RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CRISP3P54108 245 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CLDN15P56746 228 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 RAB10P61026 200 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ERVK11-1P61568 191 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 RHOBP62745 196 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 GRB2P62993 217 aaKnown RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 MEF2BQ02080 365 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SPATA45Q537H7 98 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 TCEAL5Q5H9L2 206 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 FFAR4Q5NUL3 377 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 AADACL3Q5VUY0 350 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 WDR25Q64LD2 544 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZFAND6Q6FIF0 208 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC35E4Q6ICL7 350 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SFXN4Q6P4A7 337 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ARL9Q6T311 187 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 Q6ZRG5 221 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF329Q86UD4 541 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 LRP11Q86VZ4 500 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 C1orf174Q8IYL3 243 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 TDHQ8IZJ6 230 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 MUC15Q8N387 334 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 DEFB125Q8N687 156 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF709Q8N972 641 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CDRT4Q8N9R6 151 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR5D13Q8NGL4 314 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR8S1Q8NH09 359 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR4X1Q8NH49 305 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC25A40Q8TBP6 338 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 BLNKQ8WV28 456 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 TWIST2Q8WVJ9 160 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 EMG1Q92979 244 aaKnown RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 WBP2Q969T9 261 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 DDIT4LQ96D03 193 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 STARD4Q96DR4 205 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZMYND19Q96E35 227 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SDSLQ96GA7 329 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 DNAJC30Q96LL9 226 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 PGLYRP2Q96PD5 576 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 OR6C1Q96RD1 312 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 HSPB9Q9BQS6 159 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 EFCAB11Q9BUY7 163 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ABHD6Q9BV23 337 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SAMD10Q9BYL1 202 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 DPY30Q9C005 99 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 POLR2J3Q9H1A7 115 aaKnown RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 S1PR5Q9H228 398 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 Q9N2K0 584 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 FGF20Q9NP95 211 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 SLC52A3Q9NQ40 469 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 FAM206AQ9NX38 181 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 GALPQ9UBC7 116 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 YARS2Q9Y2Z4 477 aaKnown RBP3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 PPIAL4AQ9Y536 164 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 LIPGQ9Y5X9 500 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 ETV7Q9Y603 341 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CITO14578 2027 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 MGAMO43451 1857 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 GBF1Q92538 1859 aa3.88□□□□□ -1.79
HMGB3P13-201ENST00000511263 CENPVL3A0A0U1RRI6 287 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 A0A1W2PPI3 338 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 ZNF878C9JN71 531 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 K7EP34 96 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 M0R2Z0 102 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 RS1O15537 224 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 ALOX12BO75342 701 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 HYPMO75409 117 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 HLA-AP01891 365 aaKnown RBP3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 HLA-HP01893 362 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 WNT2P09544 360 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 C8orf88P0DMB2 117 aa3.87□□□□□ -1.79
HMGB3P13-201ENST00000511263 HIST1H1CP16403 213 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms