RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 HLA-GP17693 338 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 CD9P21926 228 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 CA5AP35218 305 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 MAGEA6P43360 314 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 TGM4P49221 684 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 ZNF140P52738 457 aaPredicted RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 PSMD4P55036 377 aaKnown RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 CLDN8P56748 225 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 MTPNP58546 118 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 SLC35A1P78382 337 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 DCDP81605 110 aaKnown RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 FAM53BQ14153 422 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 DEFB109BQ30KR1 87 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 TMEM136Q6ZRR5 245 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 Q6ZS92 163 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 TRMT10CQ7L0Y3 403 aaKnown RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 GLT6D1Q7Z4J2 308 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 DAZ4Q86SG3 579 aaKnown RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 OOSP2Q86WS3 158 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 TRAPPC5Q8IUR0 188 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 SLC7A5P1Q8MH63 180 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 SYCE1Q8N0S2 351 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 CNPY4Q8N129 248 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 OR4E2Q8NGC2 313 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 OR2Y1Q8NGV0 311 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 OR6K6Q8NGW6 343 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 ACTL9Q8TC94 416 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 AGR3Q8TD06 166 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 LCN9Q8WX39 176 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 TFGQ92734 400 aaPredicted RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 RAD51AP1Q96B01 352 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 LRRC45Q96CN5 670 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 CERS2Q96G23 380 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 QKIQ96PU8 341 aaKnown RBP eCLIP1.58□□□□□ -2.16
GYPB-203ENST00000503255 NAPGQ99747 312 aaPredicted RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 SHANK2-AS3Q9BTD1 123 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 KIFC1Q9BW19 673 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 ANGPTL4Q9BY76 406 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 STMN4Q9H169 189 aaPredicted RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 ARMC7Q9H6L4 198 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 LINC00574Q9H8X3 128 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 WDR54Q9H977 334 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 DAZ1Q9NQZ3 744 aaKnown RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 PSME2Q9UL46 239 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 ARL5AQ9Y689 179 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 SLC22A7Q9Y694 548 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 SVEP1Q4LDE5 3571 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.58□□□□□ -2.16
GYPB-203ENST00000503255 ANKHD1Q8IWZ3 2542 aaKnown RBP1.58□□□□□ -2.16
GYPB-203ENST00000503255 TLN2Q9Y4G6 2542 aa1.58□□□□□ -2.16
GYPB-203ENST00000503255 PLCE1Q9P212 2302 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 TRAV8-6A0A0B4J262 113 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 NCF1BA6NI72 391 aaPredicted RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 NCF1CA8MVU1 366 aaPredicted RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 E7EQ34 232 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 PRMT5O14744 637 aaPredicted RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 PFDN6O15212 129 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 OR2B3O76000 313 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 OXTP01178 125 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 IGKV1D-16P01601 117 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 KLK1P06870 262 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 SNRPAP09012 282 aaKnown RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 MLNP12872 115 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 MSR1P21757 451 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 RPS3P23396 243 aaKnown RBP eCLIP1.57□□□□□ -2.161e-8■■■■■ 38.6
GYPB-203ENST00000503255 MSNP26038 577 aaKnown RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 IL3RAP26951 378 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 CCR7P32248 378 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 TTPAP49638 278 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 NUDT2P50583 147 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 ATP6V0D1P61421 351 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 GRB2P62993 217 aaKnown RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 ELF3P78545 371 aaPredicted RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 MEF2BQ02080 365 aaPredicted RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 ATP5G2Q06055 141 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 PRDX1Q06830 199 aaKnown RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 ST3GAL4Q11206 333 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 NKAIN1Q4KMZ8 207 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 SPIN3Q5JUX0 258 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 TMEM69Q5SWH9 247 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 MRPL2Q5T653 305 aaKnown RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 MORN3Q6PF18 240 aaPredicted RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 TBPL2Q6SJ96 375 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 FAM151BQ6UXP7 276 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 CYHR1Q6ZMK1 362 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 MRPL21Q7Z2W9 205 aaKnown RBP1.57□□□□□ -2.16
GYPB-203ENST00000503255 OR2W3Q7Z3T1 314 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 LRRC6Q86X45 466 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 PDPNQ86YL7 162 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 LRRC8AQ8IWT6 810 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 ZNF664Q8N3J9 261 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 UBL4BQ8N7F7 174 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 ST6GALNAC3Q8NDV1 305 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 PLPP5Q8NEB5 264 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 FDCSPQ8NFU4 85 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 OR5T3Q8NGG3 340 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 OR13C4Q8NGS5 318 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 ZFAND1Q8TCF1 268 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 CT55Q8WUE5 264 aa1.57□□□□□ -2.16
GYPB-203ENST00000503255 ORAOV1Q8WV07 137 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms