RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 Q8N402 240 aa13.47□□□□□ -0.25
NUP50-218ENST00000493456 MRPL30Q8TCC3 161 aaKnown RBP13.47□□□□□ -0.25
NUP50-218ENST00000493456 RDH12Q96NR8 316 aa13.47□□□□□ -0.25
NUP50-218ENST00000493456 RNF5Q99942 180 aa13.47□□□□□ -0.25
NUP50-218ENST00000493456 HIPK2Q9H2X6 1198 aa13.47□□□□□ -0.25
NUP50-218ENST00000493456 AASSQ9UDR5 926 aa13.47□□□□□ -0.25
NUP50-218ENST00000493456 GAB2Q9UQC2 676 aa13.47□□□□□ -0.25
NUP50-218ENST00000493456 LRRC42Q9Y546 428 aa13.47□□□□□ -0.25
NUP50-218ENST00000493456 CEPT1Q9Y6K0 416 aa13.47□□□□□ -0.25
NUP50-218ENST00000493456 A0A0G2JLM5 398 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 SHISA3A0PJX4 238 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 RAB29O14966 203 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 GPX5O75715 221 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 GSTP1P09211 210 aaKnown RBP13.46□□□□□ -0.25
NUP50-218ENST00000493456 OR52I1Q8NGK6 324 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 MUL1Q969V5 352 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 RETNQ9HD89 108 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 MRPS18AQ9NVS2 196 aaKnown RBP13.46□□□□□ -0.25
NUP50-218ENST00000493456 SIGLEC8Q9NYZ4 499 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 STEAP1Q9UHE8 339 aa13.46□□□□□ -0.25
NUP50-218ENST00000493456 UBE2QL1A1L167 161 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 EI24O14681 340 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 SLC22A1O15245 554 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 LIMS3P0CW19 117 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 LIMS4P0CW20 117 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 ZIK1Q3SY52 487 aaPredicted RBP13.45□□□□□ -0.26
NUP50-218ENST00000493456 DMKNQ6E0U4 476 aaPredicted RBP13.45□□□□□ -0.26
NUP50-218ENST00000493456 AWAT2Q6E213 333 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 XAF1Q6GPH4 301 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 IL34Q6ZMJ4 242 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 POC5Q8NA72 575 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 SMIM19Q96E16 107 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 Q96M66 194 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 SELENOIQ9C0D9 397 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 AMBNQ9NP70 447 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 METTL1Q9UBP6 276 aaKnown RBP13.45□□□□□ -0.26
NUP50-218ENST00000493456 WASHC3Q9Y3C0 194 aa13.45□□□□□ -0.26
NUP50-218ENST00000493456 RPL36Q9Y3U8 105 aaKnown RBP13.45□□□□□ -0.26
NUP50-218ENST00000493456 H0YJW9 148 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 H7C2Y5 167 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 PDCD6O75340 191 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 SPDEFO95238 335 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 CA2P00918 260 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 CT45A6P0DMU7 189 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 CT45A5P0DMU8 189 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 CT45A7P0DMV0 189 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 MGMTP16455 207 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 FSTP19883 344 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 ALDH3A2P51648 485 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 SYNJ2BPP57105 145 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 HMGN3Q15651 99 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 LINC00322Q6ZN03 302 aaPredicted RBP13.44□□□□□ -0.26
NUP50-218ENST00000493456 JAGN1Q8N5M9 183 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 RHOXF1Q8NHV9 184 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 ORAI1Q96D31 301 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 CLCC1Q96S66 551 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 FAM110AQ9BQ89 295 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 BANF2Q9H503 90 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 ZNF355PQ9NSJ1 428 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 ABRACLQ9P1F3 81 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 SLC23A1Q9UHI7 598 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 KMT2AQ03164 3969 aa13.44□□□□□ -0.26
NUP50-218ENST00000493456 TRBV5-5A0A0J9YX44 114 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 ST8SIA5O15466 376 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 TATDN3Q17R31 274 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 RPL39P5Q59GN2 51 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 RNLSQ5VYX0 342 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 SIGIRRQ6IA17 410 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 TMPRSS11AQ6ZMR5 421 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 C5orf24Q7Z6I8 188 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 CDH26Q8IXH8 852 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 OR5AN1Q8NGI8 311 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 OR2K2Q8NGT1 345 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 LINC00476Q8WZB0 136 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 GHSRQ92847 366 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 OR14A2Q96R54 314 aa13.43□□□□□ -0.26
NUP50-218ENST00000493456 TRAV8-7A0A075B6U6 113 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 ANKRD34BA5PLL1 514 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 SLC25A17O43808 307 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 CRTAPO75718 401 aaPredicted RBP13.42□□□□□ -0.26
NUP50-218ENST00000493456 AADACP22760 399 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 PSG5Q15238 335 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 Q499Y3 187 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 GLDNQ6ZMI3 551 aaPredicted RBP13.42□□□□□ -0.26
NUP50-218ENST00000493456 LAX1Q8IWV1 398 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 GRPEL2Q8TAA5 225 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 IL1F10Q8WWZ1 152 aa13.42□□□□□ -0.26
NUP50-218ENST00000493456 TSNAXQ99598 290 aaKnown RBP13.42□□□□□ -0.26
NUP50-218ENST00000493456 ITGB1BP1O14713 200 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 OGG1O15527 345 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 BRI3O95415 125 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 CSN3P07498 182 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 CD81P60033 236 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 FXYD3Q14802 87 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 YIF1BQ5BJH7 314 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 OR13C5Q8NGS8 318 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 PLEKHA3Q9HB20 300 aa13.41□□□□□ -0.26
NUP50-218ENST00000493456 FGF20Q9NP95 211 aaPredicted RBP13.41□□□□□ -0.26
NUP50-218ENST00000493456 PEF1Q9UBV8 284 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms