RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 SAA2P0DJI9 122 aaPredicted RBP8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 IGFBP3P17936 291 aaPredicted RBP8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 GABRB1P18505 474 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 FSTP19883 344 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 ALDH3A2P51648 485 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 TATDN3Q17R31 274 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 LCN12Q6JVE5 192 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 UNQ5815/PRO19632Q6UWF5 114 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 TMPRSS11AQ6ZMR5 421 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 Q8N402 240 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 OR52L2PQ8NGH6 319 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 SMIM19Q96E16 107 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 RDH12Q96NR8 316 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 FBXL15Q9H469 300 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 ABRACLQ9P1F3 81 aa8.42□□□□□ -1.06
SNRNP200-207ENST00000493271 C13orf42A0A1B0GVH6 325 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 ITGB1BP1O14713 200 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 SLC22A1O15245 554 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 BRI3O95415 125 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 TRGV3P03979 118 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 GSTP1P09211 210 aaKnown RBP8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 LIMS3P0CW19 117 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 LIMS4P0CW20 117 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 EGR2P11161 476 aaPredicted RBP8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 PPP1CCP36873 323 aaKnown RBP8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 CAPGP40121 348 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 HSPA13P48723 471 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 GTF2A1P52655 376 aaPredicted RBP8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 KLF5Q13887 457 aaPredicted RBP8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 GNMTQ14749 295 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 Q499Y3 187 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 YIF1BQ5BJH7 314 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 OGFRL1Q5TC84 451 aaPredicted RBP8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 AWAT2Q6E213 333 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 GLIPR1L1Q6UWM5 242 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 FAM131AQ6UXB0 335 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 OR52I1Q8NGK6 324 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 OR9G4Q8NGQ1 327 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 OR2K2Q8NGT1 345 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 RHOXF1Q8NHV9 184 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 MRPL30Q8TCC3 161 aaKnown RBP8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 TMEM68Q96MH6 324 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 Q9H521 79 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 GHRLQ9UBU3 117 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 WASHC3Q9Y3C0 194 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 A3GALT2U3KPV4 340 aa8.41□□□□□ -1.06
SNRNP200-207ENST00000493271 TRBV5-5A0A0J9YX44 114 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 SHISA3A0PJX4 238 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 IRGMA1A4Y4 181 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 EI24O14681 340 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 OGG1O15527 345 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 PDCD6O75340 191 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 MGMTP16455 207 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 AADACP22760 399 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 DCKP27707 260 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 OR3A3P47888 321 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 HMGN3Q15651 99 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 LAX1Q8IWV1 398 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 JAGN1Q8N5M9 183 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 NKAIN3Q8N8D7 197 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 POC5Q8NA72 575 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 LFNGQ8NES3 379 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 OR5AN1Q8NGI8 311 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 CASTOR1Q8WTX7 329 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 THRSPQ92748 146 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 GHSRQ92847 366 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 MUL1Q969V5 352 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 RBMXL1Q96E39 390 aaKnown RBP8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 Q96M66 194 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 MS4A10Q96PG2 267 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 TSNAXQ99598 290 aaKnown RBP8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 THAP7Q9BT49 309 aaPredicted RBP8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 SELENOIQ9C0D9 397 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 IFI27L2Q9H2X8 130 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 FGF20Q9NP95 211 aaPredicted RBP8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 C8orf4Q9NR00 106 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 BATF3Q9NR55 127 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 BABAM2Q9NXR7 383 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 SLC23A1Q9UHI7 598 aa8.4□□□□□ -1.06
SNRNP200-207ENST00000493271 H7C2Y5 167 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 ZIK1Q3SY52 487 aaPredicted RBP8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 C6orf141Q5SZD1 244 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 DMKNQ6E0U4 476 aaPredicted RBP8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 HAPLN4Q86UW8 402 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 EDARADDQ8WWZ3 215 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 OR14A2Q96R54 314 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 UQCC2Q9BRT2 126 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 TMED9Q9BVK6 235 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 AMBNQ9NP70 447 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 METTL1Q9UBP6 276 aaKnown RBP8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 CEPT1Q9Y6K0 416 aa8.39□□□□□ -1.07
SNRNP200-207ENST00000493271 UBE2QL1A1L167 161 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 H0YJW9 148 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 FCN1O00602 326 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 SLC25A17O43808 307 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 AIREO43918 545 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 CRTAPO75718 401 aaPredicted RBP8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 CA2P00918 260 aa8.38□□□□□ -1.07
SNRNP200-207ENST00000493271 UBBP0CG47 229 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms