RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 PNLIPRP3Q17RR3 467 aa8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 C2orf68Q2NKX9 166 aa8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 CDNFQ49AH0 187 aa8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 HACD4Q5VWC8 232 aa8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 Q6ZS46 218 aa8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 WIPF2Q8TF74 440 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 AGMATQ9BSE5 352 aa8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 MRPS26Q9BYN8 205 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 TOLLIPQ9H0E2 274 aa8.48□□□□□ -1.05
CDC42SE1-206ENST00000492796 TRBV6-7A0A0A0MS04 114 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 IGKV1-6A0A0C4DH72 117 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 FBXO24O75426 580 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 RPS19P39019 145 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 OR3A3P47888 321 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 GNG2P59768 71 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 HNF4GQ14541 408 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 TMEM95Q3KNT9 176 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 ZNF260Q3ZCT1 412 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 OR5H6Q8NGV6 325 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 OR10J5Q8NHC4 309 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 SLC25A46Q96AG3 418 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 KCTD12Q96CX2 325 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 SLC25A38Q96DW6 304 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 NABP2Q9BQ15 211 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 MRPL20Q9BYC9 149 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 C11orf54Q9H0W9 315 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 DCSTAMPQ9H295 470 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 LIN7CQ9NUP9 197 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 RDH8Q9NYR8 311 aa8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 ZNF230Q9UIE0 474 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE1-206ENST00000492796 TMEM235A6NFC5 223 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 OR5H14A6NHG9 310 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 SH2D7A6NKC9 451 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 NCBP2LA6PVI3 153 aaKnown RBP8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 ZNF736B4DX44 427 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 BET1O15155 118 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 GSTT2P0CG29 244 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 GSTT2BP0CG30 244 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 GPR12P47775 334 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 NCS1P62166 190 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 IGSF11Q5DX21 431 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 C9orf152Q5JTZ5 239 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 UBE2NLQ5JXB2 153 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 TREML4Q6UXN2 200 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 ABHD14BQ96IU4 210 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 ZNF251Q9BRH9 671 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 PARP12Q9H0J9 701 aaKnown RBP8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 ABCG5Q9H222 651 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 MMP27Q9H306 513 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 DIABLOQ9NR28 239 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 ZNF221Q9UK13 617 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 TRRAPQ9Y4A5 3859 aa8.46□□□□□ -1.06
CDC42SE1-206ENST00000492796 KCNAB3O43448 404 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 GABARAPO95166 117 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 IGHG2P01859 326 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 CSF1P09603 554 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 CTXN2P0C2S0 81 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 MC5RP33032 325 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 VBP1P61758 197 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 MMDQ15546 238 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 RPL39P5Q59GN2 51 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 SLC35E3Q7Z769 313 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 ANKRD13BQ86YJ7 626 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 FOXRED2Q8IWF2 684 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 FAM71E2Q8N5Q1 922 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 Q8N9W7 124 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 CHPT1Q8WUD6 406 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 NUDCD2Q8WVJ2 157 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 MAFIPQ8WZ33 124 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 S100A16Q96FQ6 103 aaKnown RBP8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 RASL11BQ9BPW5 248 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 GINS4Q9BRT9 223 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 PLSCR3Q9NRY6 295 aa8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 ELF5Q9UKW6 265 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE1-206ENST00000492796 TRAV18A0A075B6X5 111 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 IGKV1D-8A0A087WSZ0 117 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 H0YJW9 148 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 WIPF1O43516 503 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 XRCC3O43542 346 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 SSX5O60225 188 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 RBBP9O75884 186 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 CT45A6P0DMU7 189 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 CT45A5P0DMU8 189 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 CT45A7P0DMV0 189 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 CD28P10747 220 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 ALDH3B2P48448 385 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 ACTBP60709 375 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 CNIH2Q6PI25 160 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 GPR141Q7Z602 305 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 CENPVQ7Z7K6 275 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 NDUFA11Q86Y39 141 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 H1FOOQ8IZA3 346 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 SAMD12Q8N8I0 201 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 C11orf44Q8N8P7 122 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 OR5AU1Q8NGC0 362 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 OR4X2Q8NGF9 303 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 OR5AN1Q8NGI8 311 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 ACOT12Q8WYK0 555 aa8.44□□□□□ -1.06
CDC42SE1-206ENST00000492796 CMTM3Q96MX0 182 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms