RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SLC25A31Q9H0C2 315 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 TXNIPQ9H3M7 391 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 ZDHHC11Q9H8X9 412 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC25A22Q9H936 323 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 VPS29Q9UBQ0 182 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 DKKL1Q9UK85 242 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 NDUFAF1Q9Y375 327 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 ARL5AQ9Y689 179 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 DOCK8Q8NF50 2099 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 ZDBF2Q9HCK1 2354 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 F5P12259 2224 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 CFAP54Q96N23 3096 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 M0R1X1 148 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 PEX7O00628 323 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 PHYHO14832 338 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 PSPHP1O15172 72 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SUPT3HO75486 399 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ATP5G1P05496 136 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SNRPAP09012 282 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CD99P14209 185 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 UCHL3P15374 230 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 HMGA1P17096 107 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CCNE1P24864 410 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MIPP30301 263 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ALDH3A1P30838 453 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 RPL5P46777 297 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SULT1A1P50225 295 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SULT1A2P50226 295 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CDK9P50750 372 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CRISP3P54108 245 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 DIO3P55073 304 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TAS2R41P59536 307 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 DEFA1P59665 94 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 NAA20P61599 178 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 RPL19P84098 196 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TFAMQ00059 246 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MEF2CQ06413 473 aaPredicted RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MAPK14Q16539 360 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TIMM50Q3ZCQ8 353 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 Q499Y3 187 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 YIF1BQ5BJH7 314 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CASC10Q5T4H9 136 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM222AQ5U5X8 452 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM131AQ6UXB0 335 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TMUB2Q71RG4 321 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SMIM15Q7Z3B0 74 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MARCH3Q86UD3 253 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CADM2Q8N3J6 435 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ZIC4Q8N9L1 334 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 C20orf203Q8NBC4 194 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 KLHL30-AS1Q8NEE0 82 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 OR4P4Q8NGL7 312 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 OR1L8Q8NGR8 309 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 OR2K2Q8NGT1 345 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 C16orf78Q8WTQ4 265 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 RDH5Q92781 318 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 NEURL3Q96EH8 262 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TCEAL4Q96EI5 215 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SMIM8Q96KF7 97 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 RILPQ96NA2 401 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 PRSS27Q9BQR3 290 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF649Q9BS31 505 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 LRRC61Q9BV99 259 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 COMMD9Q9P000 198 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF223Q9UK11 482 aaPredicted RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 RAB26Q9ULW5 256 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 COQ4Q9Y3A0 265 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MOB4Q9Y3A3 225 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF292O60281 2723 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 DMXL1Q9Y485 3027 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TSC2P49815 1807 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CACNA1HO95180 2353 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ADAMTS9Q9P2N4 1935 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 GPR179Q6PRD1 2367 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TRAV8-2A0A0B4J237 113 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM159BA6NKW6 160 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 FAM183AA6NL82 134 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 LOC730098B7Z3J9 87 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 C15orf65H3BRN8 121 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 DNASE2O00115 360 aaPredicted RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ARL6IP5O75915 188 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SUPT7LO94864 414 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 BGLAPP02818 100 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MT-ND4P03905 459 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TDGF1P13385 188 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 RAB3AP20336 220 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 HTR1EP28566 365 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MPIP34949 423 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MAGEA12P43365 314 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 MAP2K4P45985 399 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 GZMMP51124 257 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 TDGF1P3P51864 188 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 VSX2P58304 361 aaPredicted RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SPCS3P61009 180 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 SNRPFP62306 86 aaKnown RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 CRADDP78560 199 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 HPCAP84074 193 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 JOSD1Q15040 202 aaPredicted RBP2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 AKIRIN2Q53H80 203 aa2.24□□□□□ -2.05
DEPDC1-204ENST00000489862 ACSBG2Q5FVE4 666 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms