RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 OR8D2Q9GZM6 311 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 NOX3Q9HBY0 568 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 SPAG17Q6Q759 2223 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 SIPA1L1O43166 1804 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 GAGE12HA6NDE8 117 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 C9JAW5 83 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 CCL24O00175 119 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 AIFM1O95831 613 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 OR5G3P0C626 314 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 RFPL3SP0C7P2 107 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 FAM106CPP0CH98 169 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 HKR1P10072 659 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 RPL29P47914 159 aaKnown RBP5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 AQP4P55087 323 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 MEF2BQ02080 365 aaPredicted RBP5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 SLC10A2Q12908 348 aaPredicted RBP5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 IQCJQ1A5X6 159 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 FAM106AQ4KMX7 169 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 C10orf91Q5T1B1 145 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 SPATA31B1PQ5VZV4 182 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 GLIPR1L1Q6UWM5 242 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 ALKAL1Q6UXT8 129 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 PRSS41Q7RTY9 318 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 SLC47A2Q86VL8 602 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 TMEM219Q86XT9 240 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 C5orf17Q8NAS9 161 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 RELL2Q8NC24 303 aaPredicted RBP5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 BLNKQ8WV28 456 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 PP6455Q8WZ26 134 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF503Q96F45 646 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 RDH12Q96NR8 316 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 IP6K3Q96PC2 410 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 CXXC4Q9H2H0 198 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 MBNL3Q9NUK0 354 aaKnown RBP5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 HIGD1AQ9Y241 93 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 PKIGQ9Y2B9 76 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 BOD1L1Q8NFC6 3051 aa5.08□□□□□ -1.6
SMARCE1-208ENST00000474246 A0A0G2JNJ9 132 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 MSGN1A6NI15 193 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 IFITM10A6NMD0 228 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF705EA8MWA4 302 aaPredicted RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 H7C1C5 153 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 MPPED1O15442 326 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF207O43670 478 aaKnown RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 DHRS3O75911 302 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 GKN3PP0CG01 181 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 WT1P19544 449 aaPredicted RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 TGFBR1P36897 503 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 CLDN17P56750 224 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 SNRPD2P62316 118 aaKnown RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 LCN6P62502 163 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 PSG9Q00887 426 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 MEF2CQ06413 473 aaPredicted RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 ASPHD1Q5U4P2 390 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 C8orf82Q6P1X6 216 aaPredicted RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 COX8CQ7Z4L0 72 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 PPP1R27Q86WC6 154 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF433Q8N7K0 673 aaPredicted RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 OR2T12Q8NG77 320 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 MFSD8Q8NHS3 518 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 PGLYRP3Q96LB9 341 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 TSPAN32Q96QS1 320 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 ULBP3Q9BZM4 244 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 SDR39U1Q9NRG7 319 aaPredicted RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 ASIC5Q9NY37 505 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 CISD1Q9NZ45 108 aaKnown RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 Q9UFV3 132 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 COL1A2P08123 1366 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 ATAD5Q96QE3 1844 aa5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 TRIP12Q14669 1992 aaPredicted RBP5.07□□□□□ -1.6
SMARCE1-208ENST00000474246 E7ENX8 843 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 OVOL3O00110 214 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 EEDO75530 441 aaKnown RBP5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 REG1AP05451 166 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 IL3P08700 152 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 OR5AL1P0C617 328 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 AKAIN1P0CW23 69 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 CT45A10P0DMU9 189 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 TNFSF8P32971 234 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 ARL2P36404 184 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 FBXW4P57775 412 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 TIMM50Q3ZCQ8 353 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 TMEM52BQ4KMG9 183 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 AWAT1Q58HT5 328 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 HSD11B1LQ7Z5J1 315 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 C17orf64Q86WR6 236 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 OOSP2Q86WS3 158 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 CBLN2Q8IUK8 224 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 OR7A2PQ8NGA2 310 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 OR1S1Q8NH92 325 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 OR1L1Q8NH94 360 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF431Q8TF32 576 aaPredicted RBP5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 PCED1BQ96HM7 432 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 DCTN5Q9BTE1 182 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 DERL1Q9BUN8 251 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF471Q9BX82 626 aaPredicted RBP5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 TMEM59Q9BXS4 323 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 OR2H1Q9GZK4 316 aa5.06□□□□□ -1.6
SMARCE1-208ENST00000474246 RNASE7Q9H1E1 156 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms