RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 IGHV3-35A0A0C4DH35 117 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 TEX48A0A1B0GUV7 120 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 UNC119BA6NIH7 251 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 J3KTA2 159 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 ARPC3O15145 178 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 ITM2AO43736 263 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 OR2J3O76001 311 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 DBTP11182 482 aaKnown RBP4.46□□□□□ -1.7
HDAC3-206ENST00000471968 IDO1P14902 403 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 MAS1LP35410 378 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 PSG5Q15238 335 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 PAN3Q58A45 887 aaKnown RBP4.46□□□□□ -1.7
HDAC3-206ENST00000471968 RSBN1Q5VWQ0 802 aaPredicted RBP4.46□□□□□ -1.7
HDAC3-206ENST00000471968 Q6ZRU5 148 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 ERI1Q8IV48 349 aaKnown RBP4.46□□□□□ -1.7
HDAC3-206ENST00000471968 OFCC1Q8IZS5 231 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 OR6K6Q8NGW6 343 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 PLPPR1Q8TBJ4 325 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 FANK1Q8TC84 345 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 TLCD1Q96CP7 247 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 PHB2Q99623 299 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 VCX3BQ9H321 246 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 NCOR1P1Q9H4R4 102 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 KAT8Q9H7Z6 458 aaKnown RBP4.46□□□□□ -1.7
HDAC3-206ENST00000471968 VCX3AQ9NNX9 186 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 FAM206AQ9NX38 181 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 GNG12Q9UBI6 72 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 ING4Q9UNL4 249 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 UFC1Q9Y3C8 167 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 LRRC42Q9Y546 428 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 CDH10Q9Y6N8 788 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 S4R3C0 116 aa4.46□□□□□ -1.7
HDAC3-206ENST00000471968 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
HDAC3-206ENST00000471968 TRBV9A0A0B4J1U6 114 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 TMEM189A5PLL7 270 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 FAM90A7PA6NKC0 464 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 H0YJX3 145 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 C15orf65H3BRN8 121 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 UBDO15205 165 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 IGLV3-1P01715 115 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 OR9G9P0C7N8 305 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 SPP1P10451 314 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 MAGEA2P43356 314 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 RANBP1P43487 201 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 DEFB131AP59861 70 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 SRSF3P84103 164 aaKnown RBP4.45□□□□□ -1.7
HDAC3-206ENST00000471968 PJVKQ0ZLH3 352 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 OXA1LQ15070 435 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 Q3ZCU0 254 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 SLC25A30Q5SVS4 291 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 C6orf141Q5SZD1 244 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 LILRB2Q8N423 598 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 MFSD4AQ8N468 514 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 TEX45Q8NA69 505 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 GIMAP1Q8WWP7 306 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 BORCS8Q96FH0 119 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 UPK3BQ9BT76 320 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 ALG8Q9BVK2 526 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 DPH3P1Q9H4G8 78 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 DNAJC4Q9NNZ3 241 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 BLOC1S6Q9UL45 172 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
HDAC3-206ENST00000471968 TRBV5-3A0A0A0MS03 114 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 DPPA5A6NC42 116 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 H3BNX3 289 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 H7C2Y5 167 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 FFAR1O14842 300 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 MPPED1O15442 326 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 SULT1B1O43704 296 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 ATP5HO75947 161 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 ZNF682O95780 498 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 FADS2O95864 444 aaKnown RBP4.44□□□□□ -1.7
HDAC3-206ENST00000471968 RPA2P15927 270 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 GZMHP20718 246 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 GALP22466 123 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 FUT6P51993 359 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 DAD1P61803 113 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 HTD2P86397 168 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 UBE2V2Q15819 145 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 PAGE3Q5JUK9 113 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 GLDNQ6ZMI3 551 aaPredicted RBP4.44□□□□□ -1.7
HDAC3-206ENST00000471968 TRPT1Q86TN4 253 aaKnown RBP4.44□□□□□ -1.7
HDAC3-206ENST00000471968 NFE4Q86UQ8 179 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 ODF3L1Q8IXM7 274 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 THEM6Q8WUY1 208 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 RNF141Q8WVD5 230 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 MRPS24Q96EL2 167 aaKnown RBP4.44□□□□□ -1.7
HDAC3-206ENST00000471968 INTS14Q96SY0 518 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 OR52D1Q9H346 318 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 TAS2R1Q9NYW7 299 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 SNX13Q9Y5W8 968 aa4.44□□□□□ -1.7
HDAC3-206ENST00000471968 PUS1Q9Y606 427 aaKnown RBP eCLIP4.44□□□□□ -1.7
HDAC3-206ENST00000471968 TRAV24A0A0B4J272 114 aa4.43□□□□□ -1.7
HDAC3-206ENST00000471968 IGKV1-12A0A0C4DH73 117 aa4.43□□□□□ -1.7
HDAC3-206ENST00000471968 TMEM269A0A1B0GVZ9 245 aa4.43□□□□□ -1.7
HDAC3-206ENST00000471968 F5H768 121 aa4.43□□□□□ -1.7
HDAC3-206ENST00000471968 ANGPT2O15123 496 aa4.43□□□□□ -1.7
HDAC3-206ENST00000471968 KRT36O76013 467 aa4.43□□□□□ -1.7
HDAC3-206ENST00000471968 IGKV1D-12P01611 117 aa4.43□□□□□ -1.7
HDAC3-206ENST00000471968 LYNP07948 512 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms