RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CASTOR1Q8WTX7 329 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 DCUN1D4Q92564 292 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 IFI27L2Q9H2X8 130 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 FBXL15Q9H469 300 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 PLEKHJ1Q9NW61 149 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 FBXO7Q9Y3I1 522 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 U3KQK5 164 aa10.31□□□□□ -0.76
CPSF4-210ENST00000469897 RAB29O14966 203 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 SOCS1O15524 211 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 NDUFA3O95167 84 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 OR8U8P0C7N1 319 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 CD37P11049 281 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 QRFPP83859 136 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 RUNX1Q01196 453 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 UNC119Q13432 240 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 ECSCRQ19T08 205 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 HSD17B12Q53GQ0 312 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 FAM131AQ6UXB0 335 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 SVOPQ8N4V2 548 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 PHYHIPQ92561 330 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 ABHD14BQ96IU4 210 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 MND1Q9BWT6 205 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 TM2D1Q9BX74 207 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 TMEM59Q9BXS4 323 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 PARP12Q9H0J9 701 aaKnown RBP10.3□□□□□ -0.76
CPSF4-210ENST00000469897 PIPOXQ9P0Z9 390 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 SLC23A1Q9UHI7 598 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 RNF150Q9ULK6 438 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 A3GALT2U3KPV4 340 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 COL7A1Q02388 2944 aa10.3□□□□□ -0.76
CPSF4-210ENST00000469897 KMT2CQ8NEZ4 4911 aaKnown RBP10.29□□□□□ -0.76
CPSF4-210ENST00000469897 A0A0A6YYD4 124 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 A0A1W2PN81 502 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 TMEM14DPA8MWL7 114 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 SLC22A1O15245 554 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 SOX15O60248 233 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 NAPSAO96009 420 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 GSTP1P09211 210 aaKnown RBP10.29□□□□□ -0.76
CPSF4-210ENST00000469897 EGR2P11161 476 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-210ENST00000469897 SNRPBP14678 240 aaKnown RBP10.29□□□□□ -0.76
CPSF4-210ENST00000469897 CHRNA7P36544 502 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 CEACAM6P40199 344 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 INSL3P51460 131 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 PLGLAQ15195 96 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 SPHARQ15513 63 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 MED22Q15528 200 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 RNLSQ5VYX0 342 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 ZNF660Q6AZW8 331 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-210ENST00000469897 ZNF880Q6PDB4 577 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 DLX4Q92988 240 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-210ENST00000469897 TMEM203Q969S6 136 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 CLCC1Q96S66 551 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 HDHD3Q9BSH5 251 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-210ENST00000469897 C11orf54Q9H0W9 315 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-210ENST00000469897 LPAR5Q9H1C0 372 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 AK3Q9UIJ7 227 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 NUBP2Q9Y5Y2 271 aa10.29□□□□□ -0.76
CPSF4-210ENST00000469897 H7C2Y5 167 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 RRHO14718 337 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 OVOL1O14753 267 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 CASQ2O14958 399 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-210ENST00000469897 PROP1O75360 226 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 SCTP09683 121 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 MC5RP33032 325 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 SLURP1P55000 103 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 NDPQ00604 133 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 P2RY14Q15391 338 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 C19orf54Q5BKX5 351 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 DRAXINQ8NBI3 349 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-210ENST00000469897 OR5AN1Q8NGI8 311 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 ABHD5Q8WTS1 349 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 MS4A10Q96PG2 267 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 AGMATQ9BSE5 352 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 FAM103A1Q9BTL3 118 aaKnown RBP10.28□□□□□ -0.76
CPSF4-210ENST00000469897 OR1A1Q9P1Q5 309 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 GAB2Q9UQC2 676 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 LSM2Q9Y333 95 aaKnown RBP10.28□□□□□ -0.76
CPSF4-210ENST00000469897 AK6Q9Y3D8 172 aaKnown RBP10.28□□□□□ -0.76
CPSF4-210ENST00000469897 SMAD5-AS1Q9Y6J3 95 aa10.28□□□□□ -0.76
CPSF4-210ENST00000469897 LINC01619G3V211 115 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 H0YJW9 148 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 SAP30O75446 220 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 BPNT1O95861 308 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 UCHL1P09936 223 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 ARSBP15848 533 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 ZBTB25P24278 435 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 TMEM50BP56557 158 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 LINC00205P59089 165 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 TMEM267Q0VDI3 215 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-210ENST00000469897 PSG5Q15238 335 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 LIPKQ5VXJ0 399 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 FAM71F2Q6NXP2 309 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 ZNF429Q86V71 674 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 PPP1R27Q86WC6 154 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 FAM89BQ8N5H3 189 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 OR6M1Q8NGM8 313 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 GFI1Q99684 422 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 TOLLIPQ9H0E2 274 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 GHITMQ9H3K2 345 aa10.27□□□□□ -0.77
CPSF4-210ENST00000469897 RIMS4Q9H426 269 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms