RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 LRRC42Q9Y546 428 aa13.26□□□□□ -0.29
HMGN1-209ENST00000463631 TRBV5-7A0A0A0MS05 114 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 PDCD6O75340 191 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 RBBP9O75884 186 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 LALBAP00709 142 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 HMGN3Q15651 99 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 ADAMTSL5Q6ZMM2 481 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 GALMQ96C23 342 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 RHOVQ96L33 236 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 BANF2Q9H503 90 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 PIPOXQ9P0Z9 390 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 A3GALT2U3KPV4 340 aa13.25□□□□□ -0.29
HMGN1-209ENST00000463631 UBE2QL1A1L167 161 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 WBP4O75554 376 aaKnown RBP13.24□□□□□ -0.29
HMGN1-209ENST00000463631 IGHV3-11P01762 117 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 TFAP2AP05549 437 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 TPPP2P59282 170 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 HAPLN4Q86UW8 402 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 PPP1R27Q86WC6 154 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 ANKRD13BQ86YJ7 626 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 CYYR1Q96J86 154 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 PGLYRP3Q96LB9 341 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 OR14A2Q96R54 314 aa13.24□□□□□ -0.29
HMGN1-209ENST00000463631 CNOT2Q9NZN8 540 aaKnown RBP13.24□□□□□ -0.29
HMGN1-209ENST00000463631 LOC100130705A0A1B0GUX0 176 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 FCN1O00602 326 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 CRTAPO75718 401 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-209ENST00000463631 CT45A6P0DMU7 189 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 CT45A5P0DMU8 189 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 CT45A7P0DMV0 189 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 CD40LGP29965 261 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 MC5RP33032 325 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 PLGLAQ15195 96 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 ZFP1Q6P2D0 407 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 C5orf24Q7Z6I8 188 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 ABHD5Q8WTS1 349 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 RNF5Q99942 180 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 C9orf16Q9BUW7 83 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 STEAP1Q9UHE8 339 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 SLC23A1Q9UHI7 598 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 DIMT1Q9UNQ2 313 aaKnown RBP13.23□□□□□ -0.29
HMGN1-209ENST00000463631 GAB2Q9UQC2 676 aa13.23□□□□□ -0.29
HMGN1-209ENST00000463631 IRGMA1A4Y4 181 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 H0YJW9 148 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 RAB29O14966 203 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 ZP3P21754 424 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 SMN1Q16637 294 aaKnown RBP13.22□□□□□ -0.29
HMGN1-209ENST00000463631 HAGHQ16775 308 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 ZNF562Q6V9R5 426 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 NKAIN3Q8N8D7 197 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 ZNF485Q8NCK3 441 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 LFNGQ8NES3 379 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 OR5AN1Q8NGI8 311 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 UQCC2Q9BRT2 126 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 THAP7Q9BT49 309 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-209ENST00000463631 RSRP1Q9BUV0 290 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 RANGRFQ9HD47 186 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-209ENST00000463631 ABRACLQ9P1F3 81 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 GHRLQ9UBU3 117 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 WASHC3Q9Y3C0 194 aa13.22□□□□□ -0.29
HMGN1-209ENST00000463631 H3BUA1 57 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 ITGB1BP1O14713 200 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 ST8SIA5O15466 376 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 JTBO76095 146 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 TRGV3P03979 118 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 ARSBP15848 533 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 MYL12AP19105 171 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 CAPGP40121 348 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 MOGAT2Q3SYC2 334 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 MS4A10Q96PG2 267 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 SLC29A1Q99808 456 aa13.21□□□□□ -0.29
HMGN1-209ENST00000463631 FAM103A1Q9BTL3 118 aaKnown RBP13.21□□□□□ -0.29
HMGN1-209ENST00000463631 EXOSC1Q9Y3B2 195 aaKnown RBP13.21□□□□□ -0.29
HMGN1-209ENST00000463631 SPDEFO95238 335 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 NAPSAO96009 420 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 IFNA6P05013 189 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 RPL39P5Q59GN2 51 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 SVOPQ8N4V2 548 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 FAM46BQ96A09 425 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 DERL3Q96Q80 235 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 SULT4A1Q9BR01 284 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 AGMATQ9BSE5 352 aa13.2□□□□□ -0.3
HMGN1-209ENST00000463631 H0Y980 276 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 H7C2Y5 167 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 SLC22A1O15245 554 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 BAG2O95816 211 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 GSTP1P09211 210 aaKnown RBP13.19□□□□□ -0.3
HMGN1-209ENST00000463631 KLF5Q13887 457 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-209ENST00000463631 PSG5Q15238 335 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 ZNF880Q6PDB4 577 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 GLDNQ6ZMI3 551 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-209ENST00000463631 IL34Q6ZMJ4 242 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 MOB1BQ7L9L4 216 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 POC5Q8NA72 575 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 OR9G4Q8NGQ1 327 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 IL1F10Q8WWZ1 152 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 METTL1Q9UBP6 276 aaKnown RBP13.19□□□□□ -0.3
HMGN1-209ENST00000463631 CLEC2DQ9UHP7 191 aa13.19□□□□□ -0.3
HMGN1-209ENST00000463631 ALMS1Q8TCU4 4167 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms