RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ZNF2Q9BSG1 426 aaPredicted RBP8.26□□□□□ -1.09
UPF2-204ENST00000460569 TOLLIPQ9H0E2 274 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 OR2D2Q9H210 308 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 IFI27L2Q9H2X8 130 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 ABCB10Q9NRK6 738 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 RNF150Q9ULK6 438 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 OR2W1Q9Y3N9 320 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 NAV3Q8IVL0 2385 aa8.26□□□□□ -1.09
UPF2-204ENST00000460569 MTORP42345 2549 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 SAA2-SAA4A0A096LPE2 208 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 IGKV1D-13A0A0B4J2D9 117 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 A0A0U1RQK1 487 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 LEUTXA8MZ59 168 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 DISC1C4P0D8 188 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 SAA2P0DJI9 122 aaPredicted RBP8.25□□□□□ -1.09
UPF2-204ENST00000460569 IGKV1-13P0DP09 117 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 GPR12P47775 334 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 LUMP51884 338 aaPredicted RBP8.25□□□□□ -1.09
UPF2-204ENST00000460569 LDLRAD2Q5SZI1 272 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 TPTE2P1Q5T6R2 138 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 MINOS1Q5TGZ0 78 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 BCL6BQ8N143 479 aaPredicted RBP8.25□□□□□ -1.09
UPF2-204ENST00000460569 OR6F1Q8NGZ6 308 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 OR56B4Q8NH76 319 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 SECTM1Q8WVN6 248 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 GIMAP1Q8WWP7 306 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 TOMM40LQ969M1 308 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 RPEQ96AT9 228 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 SLC6A7Q99884 636 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 FXYD6Q9H0Q3 95 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 MCUBQ9NWR8 336 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 DPM3Q9P2X0 92 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 ZNF221Q9UK13 617 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 FAM96BQ9Y3D0 163 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 HILPDAQ9Y5L2 63 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 SOX21Q9Y651 276 aaPredicted RBP8.25□□□□□ -1.09
UPF2-204ENST00000460569 MINOS1-NBL1R4GNA1 71 aa8.25□□□□□ -1.09
UPF2-204ENST00000460569 MDFIC2A0A1B0GVS7 189 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 HSD17B6O14756 317 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 RAB29O14966 203 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 FBP1P09467 338 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 PAX6P26367 422 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 REG1BP48304 166 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 SCGB2A2Q13296 93 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 SSX2Q16385 188 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 SCGB2B2Q4G0G5 96 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 PLA1AQ53H76 456 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 ZNF660Q6AZW8 331 aaPredicted RBP8.24□□□□□ -1.09
UPF2-204ENST00000460569 C9orf139Q6ZV77 190 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 LDLRAD3Q86YD5 345 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 ODF3L1Q8IXM7 274 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 FAM216AQ8WUB2 273 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 C17orf50Q8WW18 174 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 DEDD2Q8WXF8 326 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 MOB3AQ96BX8 217 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 AGMATQ9BSE5 352 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 SLC5A7Q9GZV3 580 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 HRASLSQ9HDD0 168 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 PIPOXQ9P0Z9 390 aa8.24□□□□□ -1.09
UPF2-204ENST00000460569 TEP1Q99973 2627 aaKnown RBP8.24□□□□□ -1.09
UPF2-204ENST00000460569 OR5H14A6NHG9 310 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 LY6LH3BQJ8 138 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 UPK1BO75841 260 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 ZNF735P0CB33 412 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 ZNF137PP52743 207 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 DIAPH2-AS1Q14236 149 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 DEFB112Q30KQ8 113 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 RPL39P5Q59GN2 51 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 DHRS11Q6UWP2 260 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 TGIF2LXQ8IUE1 241 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 DYNAPQ8N1N2 210 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 ZNF645Q8N7E2 425 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.23□□□□□ -1.09
UPF2-204ENST00000460569 OR51S1Q8NGJ8 323 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 ST6GALNAC6Q969X2 333 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 MALSU1Q96EH3 234 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 AJUBAQ96IF1 538 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 S1PR3Q99500 378 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 PRRT1Q99946 306 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 SCP2D1Q9UJQ7 156 aa8.23□□□□□ -1.09
UPF2-204ENST00000460569 FN1P02751 2386 aaKnown RBP8.23□□□□□ -1.09
UPF2-204ENST00000460569 CENPXA8MT69 81 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 OOSP1A8MZH6 123 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 M0R1X1 148 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 TXNL1O43396 289 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 CRLF1O75462 422 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 SLC22A5O76082 557 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 GAPDHP04406 335 aaKnown RBP8.22□□□□□ -1.09
UPF2-204ENST00000460569 FAM157CP0CG43 387 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 PGAM2P15259 253 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 ARHGDIBP52566 201 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 ZNF816Q0VGE8 651 aaPredicted RBP8.22□□□□□ -1.09
UPF2-204ENST00000460569 BAMBIQ13145 260 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 AADACL3Q5VUY0 350 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 CCDC144NLQ6NUI1 221 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 FAM71F2Q6NXP2 309 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 C16orf87Q6PH81 154 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 IDO2Q6ZQW0 420 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
UPF2-204ENST00000460569 LHFPL1Q86WI0 220 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms