RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 DEFB119Q8N690 84 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 SIGLECL1Q8N7X8 197 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 ZNF501Q96CX3 271 aaPredicted RBP13.63□□□□□ -0.23
CNOT3-204ENST00000447684 ZNF552Q9H707 407 aaPredicted RBP13.63□□□□□ -0.23
CNOT3-204ENST00000447684 KCNS2Q9ULS6 477 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 C10orf142B7Z368 130 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 TDGF1P13385 188 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 ATP5G3P48201 142 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 ZNF90Q03938 601 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 PRDX4Q13162 271 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 HLA-BQ31612 363 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 ASCL4Q6XD76 172 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 OR6C1Q96RD1 312 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 GAL3ST2Q9H3Q3 398 aa13.63□□□□□ -0.23
CNOT3-204ENST00000447684 LOC102725191A0A1B0GVB3 256 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 HINT1P49773 126 aaPredicted RBP13.62□□□□□ -0.23
CNOT3-204ENST00000447684 LINC00310P59036 64 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 ACSF3Q4G176 576 aaPredicted RBP13.62□□□□□ -0.23
CNOT3-204ENST00000447684 SLC25A53Q5H9E4 307 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 TMEM144Q7Z5S9 345 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 MCEMP1Q8IX19 187 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 PSMF1Q92530 271 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 KLHDC7BQ96G42 594 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 RNF114Q9Y508 228 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 TRAV39A0A0B4J263 110 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 KIR2DS1A0A191URI9 304 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 C3orf80F5H4A9 247 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 IGKV1-39P01597 117 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 IGKV1D-39P04432 117 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 CA3P07451 260 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 WNT2P09544 360 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 GABRG2P18507 467 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 KIR2DS4P43632 304 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 SELENOTP62341 195 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 KIR2DS1Q14954 304 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 DAZAP2Q15038 168 aaPredicted RBP13.62□□□□□ -0.23
CNOT3-204ENST00000447684 SFRP2Q96HF1 295 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 MRPL18Q9H0U6 180 aaKnown RBP13.62□□□□□ -0.23
CNOT3-204ENST00000447684 FBXL7Q9UJT9 491 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 TRANK1O15050 2925 aa13.62□□□□□ -0.23
CNOT3-204ENST00000447684 F6UZH7 168 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 HS3ST1O14792 307 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 SH2D1BO14796 132 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.239e-17■■■■□ 22.8
CNOT3-204ENST00000447684 IGKV1-5P01602 117 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 B4GALT1P15291 398 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 GNB1P62873 340 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 TFF3Q07654 80 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 UNQ5815/PRO19632Q6UWF5 114 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 CADM4Q8NFZ8 388 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 OR1F12Q8NHA8 337 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 APH1AQ96BI3 265 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 STARD4Q96DR4 205 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 CBR3O75828 277 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 TUSC2O75896 110 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 SERPINA7P05543 415 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 RDH5Q92781 318 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 REPIN1Q9BWE0 567 aaKnown RBP13.61□□□□□ -0.23
CNOT3-204ENST00000447684 LAMTOR2Q9Y2Q5 125 aa13.61□□□□□ -0.23
CNOT3-204ENST00000447684 CBY3A6NI87 242 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 FCN1O00602 326 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 PMCHP20382 165 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 COX5AP20674 150 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 OR4B1Q8NGF8 309 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 ZNF586Q9NXT0 402 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 EYSQ5T1H1 3165 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 NKX6-3A6NJ46 265 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 MLNRO43193 412 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 SPINK4O60575 86 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 WDR1O75083 606 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 KRASP01116 189 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 ZNF32P17041 273 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 C10orf128Q5T292 105 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 KIAA0895LQ68EN5 471 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 ATOH7Q8N100 152 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 OR5P3Q8WZ94 311 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 ALKBH7Q9BT30 221 aaPredicted RBP13.6□□□□□ -0.23
CNOT3-204ENST00000447684 RNF24Q9Y225 148 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 CABIN1Q9Y6J0 2220 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 A0A1B0GX78 115 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 SLC17A3O00476 420 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 CCNOP22674 350 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 CRYGSP22914 178 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 IER3P46695 156 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 LHX2P50458 406 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 OR1D5P58170 312 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 OR2M3Q8NG83 312 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 BADQ92934 168 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 CCDC74BQ96LY2 380 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 WNT10AQ9GZT5 417 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 IL36GQ9NZH8 169 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 OR2W1Q9Y3N9 320 aa13.6□□□□□ -0.23
CNOT3-204ENST00000447684 COMPP49747 757 aaPredicted RBP13.59□□□□□ -0.23
CNOT3-204ENST00000447684 KLF3P57682 345 aaPredicted RBP13.59□□□□□ -0.23
CNOT3-204ENST00000447684 FOXL1Q12952 345 aa13.59□□□□□ -0.23
CNOT3-204ENST00000447684 C20orf204Q6ZNR8 217 aa13.59□□□□□ -0.23
CNOT3-204ENST00000447684 ERASQ7Z444 233 aa13.59□□□□□ -0.23
CNOT3-204ENST00000447684 RNF138Q8WVD3 245 aa13.59□□□□□ -0.23
CNOT3-204ENST00000447684 ALKBH3Q96Q83 286 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms