RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 SGMS2Q8NHU3 365 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 FNDC9Q8TBE3 224 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 CASTOR1Q8WTX7 329 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 MBD3L1Q8WWY6 194 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 NELFBQ8WX92 580 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 GALMQ96C23 342 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 ZMYND19Q96E35 227 aaPredicted RBP-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 PGLYRP3Q96LB9 341 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 TRNT1Q96Q11 434 aaKnown RBP-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 NABP2Q9BQ15 211 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 MED18Q9BUE0 208 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 MND1Q9BWT6 205 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 IL22Q9GZX6 179 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 GTSF1LQ9H1H1 148 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 OR51E2Q9H255 320 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 BLZF1Q9H2G9 400 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 MRPL22Q9NWU5 206 aaKnown RBP-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 NMRK1Q9NWW6 199 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 RAB20Q9NX57 234 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 ZFP30Q9Y2G7 519 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 V9GYY9 64 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 DMBT1Q9UGM3 2413 aaPredicted RBP-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 ABCB11O95342 1321 aa-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 HRNRQ86YZ3 2850 aaPredicted RBP-0.22□□□□□ -2.44
SNHG3-203ENST00000447507 KIF24Q5T7B8 1368 aa-0.22□□□□□ -2.45
SNHG3-203ENST00000447507 ZNF106Q9H2Y7 1883 aaKnown RBP-0.22□□□□□ -2.45
SNHG3-203ENST00000447507 KCPQ6ZWJ8 1503 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 EXPH5Q8NEV8 1989 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 STAB1Q9NY15 2570 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 IGHV3-64A0A075B6Q5 118 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 TRBV6-7A0A0A0MS04 114 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 IGHV1-18A0A0C4DH31 117 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 GRIFINA4D1Z8 144 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 CTAGE15A4D2H0 777 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 TRAPPC13A5PLN9 417 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 E7EWF7 191 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 I3L4J1 428 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 PSMD11O00231 422 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SHOX2O60902 331 aaPredicted RBP-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SCN2BO60939 215 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SC5DO75845 299 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 PPBPP02775 128 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 FBP1P09467 338 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 OR13C7P0DN81 318 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 CPN2P22792 545 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 CDK2P24941 298 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 IFNGR2P38484 337 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 TTPAP49638 278 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 BCAP31P51572 246 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 AKR1C2P52895 323 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 AQP5P55064 265 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 HMGN5P82970 282 aaKnown RBP-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SPAG1Q07617 926 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 BAXQ07812 192 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 USF2Q15853 346 aaPredicted RBP-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 TEX36Q5VZQ5 186 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 RESP18Q5W5W9 173 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 XKRXQ6PP77 449 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 Q6ZT83 130 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 FAM183BPQ6ZVS7 135 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 CTAGE6Q86UF2 777 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 ZBTB8OSQ8IWT0 167 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SPICQ8N5J4 248 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 ARL6IP6Q8N6S5 226 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 DAND5Q8N907 189 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 GPATCH11Q8N954 259 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 OR8G5Q8NG78 346 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 OR4A15Q8NGL6 344 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 CLDND2Q8NHS1 167 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 GPX8Q8TED1 209 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SMCR5Q8TEV8 140 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 GLYATL2Q8WU03 294 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 OR5P2Q8WZ92 322 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 GTF2H4Q92759 462 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 TOP1MTQ969P6 601 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 NMNAT3Q96T66 252 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 PLIN2Q99541 437 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 ACBD6Q9BR61 282 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 FAAP24Q9BTP7 215 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 MAP1LC3CQ9BXW4 147 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 ANKHQ9HCJ1 492 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SLC2A9Q9NRM0 540 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 NRBP2Q9NSY0 501 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SDHAF2Q9NX18 166 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 PLAC8Q9NZF1 115 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 ALG5Q9Y673 324 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 GMEB1Q9Y692 573 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 BRWD1Q9NSI6 2320 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 NSD2O96028 1365 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 FLT4P35916 1363 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 RAB3GAP2Q9H2M9 1393 aa-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 SCAF11Q99590 1463 aaKnown RBP-0.23□□□□□ -2.45
SNHG3-203ENST00000447507 E9PCH4 1651 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 TRIM64CA6NLI5 447 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 H3BT86 120 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 TXNDC9O14530 226 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 RFXANKO14593 260 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 CDIPTO14735 213 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 UBE2L6O14933 153 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms