RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 RPL23AP62750 156 aaKnown RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 SKP2Q13309 424 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 EXOSC2Q13868 293 aaKnown RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 EXOSC7Q15024 291 aaKnown RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 NEDD8Q15843 81 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 TAF9Q16594 264 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 GUCA2BQ16661 112 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 CYP51A1Q16850 503 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZSWIM7Q19AV6 140 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 TIMM50Q3ZCQ8 353 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 AGKQ53H12 422 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 TRMT12Q53H54 448 aaKnown RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 Q5BKY6 102 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 PRAMEF8Q5VWM4 474 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 PRAMEF7Q5VXH5 474 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 SLC48A1Q6P1K1 146 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 DNM1P34Q6PK57 102 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 DLEU7Q6UYE1 221 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 NUFIP2Q7Z417 695 aaKnown RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 CALHM1Q8IU99 346 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 BAP18Q8IXM2 172 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 GTPBP8Q8N3Z3 284 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 Q8N402 240 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 BPIFB2Q8N4F0 458 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZNF433Q8N7K0 673 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 CLDN22Q8N7P3 220 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 BPIFB6Q8NFQ5 453 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 OR5L1Q8NGL2 311 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 OR10K1Q8NGX5 313 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 RHEBL1Q8TAI7 183 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 STAG3L4Q8TBR4 150 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZNF675Q8TD23 568 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 GPR151Q8TDV0 419 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZNF431Q8TF32 576 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZFP90Q8TF47 636 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 FCGR1BQ92637 280 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 RORBQ92753 470 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 TMEM56Q96MV1 263 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 AMDHD1Q96NU7 426 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 OR2V2Q96R30 315 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 FMO2Q99518 471 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 SLC30A2Q9BRI3 323 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 THTPAQ9BU02 230 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 CHRDL1Q9BU40 450 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 FUNDC2Q9BWH2 189 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 FAIM2Q9BWQ8 316 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 TBL1XR1Q9BZK7 514 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 ANKRA2Q9H9E1 313 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 TPT1P8Q9HAU6 139 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 POPDC3Q9HBV1 291 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 MIEF1Q9NQG6 463 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 OR2S2Q9NQN1 319 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 SLC2A9Q9NRM0 540 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 TAS2R16Q9NYV7 291 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 DHRS4-AS1Q9P1J3 65 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 OPTCQ9UBM4 332 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZNF230Q9UIE0 474 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 KPTNQ9Y664 436 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 TMEM56-RWDD3S4R434 201 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 V9GYS6 101 aa3.45□□□□□ -1.86
HMGB3P5-201ENST00000428894 A0A0J9YW62 118 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 TRBV7-9A0A0J9YWB2 115 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 A0A1B0GUS0 222 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 TEX48A0A1B0GUV7 120 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 FAM74A7A6NL05 159 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZNF724A8MTY0 619 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 TRIM49D1C9J1S8 452 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 F6UZH7 168 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 COPEO14579 308 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 IMPA2O14732 288 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 UBDO15205 165 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZNF264O43296 627 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 SNAI2O43623 268 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 SELENOFO60613 162 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 EDF1O60869 148 aaKnown RBP3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 CNIH1O95406 144 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 TCRBP04435 133 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 KLK1P06870 262 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 MSMBP08118 114 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 COX5AP20674 150 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 IGHV1-2P23083 117 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 SLC6A1P30531 599 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 IFNGR2P38484 337 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 FRKP42685 505 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 PPOXP50336 477 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 ZNF83P51522 516 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 CRYBA4P53673 196 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 TMEM33P57088 247 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 LSM6P62312 80 aaKnown RBP3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 UBA52P62987 128 aaKnown RBP3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 FAM3AP98173 230 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 TGFBR3Q03167 851 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 RBBP4Q09028 425 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 GPR50Q13585 617 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 PEA15Q15121 130 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 FAM74A3Q4VXF1 159 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 HIST2H3PS2Q5TEC6 136 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 SMARCD3Q6STE5 483 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 ATRAIDQ6UW56 229 aa3.44□□□□□ -1.86
HMGB3P5-201ENST00000428894 ACOT7LQ6ZUV0 252 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms