RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CLDN2P57739 230 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 PSG9Q00887 426 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 RUNX1Q01196 453 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 MALLQ13021 153 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 KIR2DS3Q14952 304 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 EXOSC7Q15024 291 aaKnown RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 RNPS1Q15287 305 aaKnown RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 TBR1Q16650 682 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 LTC4SQ16873 150 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 PRICKLE4Q2TBC4 344 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 NMSQ5H8A3 153 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 Q5PR19 223 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM108Q6UXF1 575 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 LSRQ86X29 649 aaPredicted RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 LINC01555Q8NAE3 123 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR4F17Q8NGA8 305 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR10G7Q8NGN6 311 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR9G4Q8NGQ1 327 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR2K2Q8NGT1 345 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR4A16Q8NH70 328 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 VSTM2AQ8TAG5 236 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 GRAMD2BQ96HH9 432 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 RAX2Q96IS3 184 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF479Q96JC4 524 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 KLHDC3Q9BQ90 382 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 QTRT1Q9BXR0 403 aaKnown RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 LINC00470Q9BZP3 86 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF331Q9NQX6 463 aaPredicted RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 GPR27Q9NS67 375 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 LIN7CQ9NUP9 197 aaKnown RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 PRR13Q9NZ81 148 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 TAAR3PQ9P1P4 343 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 HSPB8Q9UJY1 196 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A1W2PPV9 198 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 GRIFINA4D1Z8 144 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 WIPF3A6NGB9 483 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 FOXI3A8MTJ6 420 aaPredicted RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 B4DGG1 531 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ALG1L2C9J202 215 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 F8W1H4 67 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 M0R2Z0 102 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SIVA1O15304 175 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 CRXO43186 299 aaPredicted RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 RHBDL1O75783 438 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 CXorf1O96002 111 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 PPYP01298 95 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 APCSP02743 223 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 BGLAPP02818 100 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 LIPFP07098 398 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 HIST1H1EP10412 219 aaKnown RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SRFP11831 508 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF16P17020 682 aaPredicted RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 DRD1P21728 446 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 PEBP1P30086 187 aaKnown RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 GPR183P32249 361 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 KIR2DL2P43627 348 aaPredicted RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 EMDP50402 254 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 LGALS4P56470 323 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 FOXL2P58012 376 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR1D5P58170 312 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 FXYD4P59646 89 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 CX3CL1P78423 397 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 DUSP2Q05923 314 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SLC38A11Q08AI6 406 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZP4Q12836 540 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SLAQ13239 276 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 NOGQ13253 232 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ELAVL3Q14576 367 aaKnown RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 TESK1Q15569 626 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 KISS1Q15726 138 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 PHLDA2Q53GA4 152 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 MPV17L2Q567V2 206 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM78AQ5JUQ0 283 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 UFSP1Q6NVU6 142 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM180AQ6UWF9 173 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 WDR82Q6UXN9 313 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ERASQ7Z444 233 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ATP5L2Q7Z4Y8 100 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SELENOHQ8IZQ5 122 aaKnown RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR8I2Q8N0Y5 310 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 LILRA3Q8N6C8 439 aaPredicted RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF525Q8N782 197 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF439Q8NDP4 499 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR13H1Q8NG92 308 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR4X2Q8NGF9 303 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR8B3Q8NGG8 313 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR1N2Q8NGR9 330 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR10AG1Q8NH19 301 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 WIPF2Q8TF74 440 aaPredicted RBP4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM190Q8WZ59 177 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 POM121L2Q96KW2 1035 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 Q96M66 194 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR8B2Q96RD0 313 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SPATA25Q9BR10 227 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 APOOQ9BUR5 198 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 SPANXDQ9BXN6 97 aa4.8□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF160Q9HCG1 818 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms