RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZDHHC22Q8N966 263 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR9I1Q8NGQ6 314 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 Q8WTZ3 238 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 AP3S1Q92572 193 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 IMP4Q96G21 291 aaKnown RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 YPEL4Q96NS1 127 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 PRRT1Q99946 306 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 HOPXQ9BPY8 73 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 MED18Q9BUE0 208 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 CHCHD7Q9BUK0 85 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 TBL1XR1Q9BZK7 514 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 TXNIPQ9H3M7 391 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 MRPL40Q9NQ50 206 aaKnown RBP1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 VPS29Q9UBQ0 182 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 FBXO5Q9UKT4 447 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 POLR1DQ9Y2S0 133 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 HDGFL3Q9Y3E1 203 aa1.84□□□□□ -2.11
HMGB1P49-201ENST00000418882 PCF11O94913 1555 aaKnown RBP1.84□□□□□ -2.12
HMGB1P49-201ENST00000418882 KIF15Q9NS87 1388 aa1.84□□□□□ -2.12
HMGB1P49-201ENST00000418882 ITGB4P16144 1822 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 TEX50A0A1B0GTY4 177 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CD300LBA8K4G0 201 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 ZNF878C9JN71 531 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 C15orf65H3BRN8 121 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 K7EPK0 472 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 SLC37A4O43826 429 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 PLIN3O60664 434 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 HAND1O96004 215 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 HBZP02008 142 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 RPSAP08865 295 aaKnown RBP1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CST2P09228 141 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 OR13C7P0DN81 318 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CGB3P0DN86 165 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CGB7P0DN87 165 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CTSEP14091 401 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CD36P16671 472 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CFL1P23528 166 aaKnown RBP1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 GADD45AP24522 165 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 SLC6A1P30531 599 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 TGFBR2P37173 567 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 MAP2K4P45985 399 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 SULT1A1P50225 295 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CDK9P50750 372 aaKnown RBP1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 GZMMP51124 257 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 CTBP2P56545 445 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 SPCS3P61009 180 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 RAB5BP61020 215 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 DAD1P61803 113 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 RPS24P62847 133 aaKnown RBP1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 PSG4Q00888 419 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 PRDX4Q13162 271 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 PAFAH1B3Q15102 231 aaKnown RBP1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 HIST3H3Q16695 136 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 TRMT12Q53H54 448 aaKnown RBP1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 AKIRIN2Q53H80 203 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 YIF1BQ5BJH7 314 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 TMEM42Q69YG0 159 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 EBLN2Q6P2I7 272 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 TCF23Q7RTU1 214 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 ZNF550Q7Z398 422 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 GLT6D1Q7Z4J2 308 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 ATP5L2Q7Z4Y8 100 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 DPPA2Q7Z7J5 298 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 ORMDL3Q8N138 153 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 C1orf158Q8N1D5 194 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 ZNF676Q8N7Q3 588 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 PXT1Q8NFP0 134 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 OR1L8Q8NGR8 309 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 OR5H2Q8NGV7 314 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 SLC35B4Q969S0 331 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 TMBIM1Q969X1 311 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 APOBEC3DQ96AK3 386 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 ACY3Q96HD9 319 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 REEP6Q96HR9 211 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 MARVELD1Q9BSK0 173 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 THTPAQ9BU02 230 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 TMEM109Q9BVC6 243 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 UBQLN4Q9NRR5 601 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 GLTPQ9NZD2 209 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 ZNF492Q9P255 531 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 GLS2Q9UI32 602 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 PKIGQ9Y2B9 76 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 PRELID3BQ9Y3B1 194 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 PRR14LQ5THK1 2151 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 SIGLEC1Q9BZZ2 1709 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 NOS1P29475 1434 aa1.83□□□□□ -2.12
HMGB1P49-201ENST00000418882 LOXHD1Q8IVV2 1947 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 TMED7-TICAM2A0A0A6YYA0 188 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 IGKV1-12A0A0C4DH73 117 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 LOC105371267A0A1B0GV96 52 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 E5RI56 91 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 INMT-MINDY4F8WBC2 141 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 H0YJX3 145 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 MRASO14807 208 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 FSTL3O95633 263 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 LTAP01374 205 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 IGKV1D-12P01611 117 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 FBP1P09467 338 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 CYBAP13498 195 aa1.82□□□□□ -2.12
HMGB1P49-201ENST00000418882 GTF2F2P13984 249 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms