RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ABRACLQ9P1F3 81 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 STEAP1Q9UHE8 339 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 PSORS1C1Q9UIG5 152 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
RPS28-201ENST00000417088 ERGIC3Q9Y282 383 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 NUBP2Q9Y5Y2 271 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 FCN1O00602 326 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 RAB29O14966 203 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 LGALS1P09382 135 aaKnown RBP11.44□□□□□ -0.58
RPS28-201ENST00000417088 UBBP0CG47 229 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 CT45A6P0DMU7 189 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 CT45A5P0DMU8 189 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 CT45A7P0DMV0 189 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 MAPK3P27361 379 aaPredicted RBP11.44□□□□□ -0.58
RPS28-201ENST00000417088 HTR2CP28335 458 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 RPS27AP62979 156 aaKnown RBP11.44□□□□□ -0.58
RPS28-201ENST00000417088 GABPB1Q06547 395 aaPredicted RBP11.44□□□□□ -0.58
RPS28-201ENST00000417088 ZNF880Q6PDB4 577 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 OVCH2Q7RTZ1 564 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 SVOPQ8N4V2 548 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 MUC7Q8TAX7 377 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 THRSPQ92748 146 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 RCHY1Q96PM5 261 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 PARP12Q9H0J9 701 aaKnown RBP11.44□□□□□ -0.58
RPS28-201ENST00000417088 PIPOXQ9P0Z9 390 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 A3GALT2U3KPV4 340 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 TENM2Q9NT68 2774 aa11.44□□□□□ -0.58
RPS28-201ENST00000417088 IGHV4OR15-8A0A075B7B6 117 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 A0A087WW49 117 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 H0YJW9 148 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 MYL12BO14950 172 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 NAPSAO96009 420 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 GP9P14770 177 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 ACSM3Q53FZ2 586 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 C1orf100Q5SVJ3 147 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 CASC10Q5T4H9 136 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 ACSM6Q6P461 480 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 CD200R1LQ6Q8B3 271 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 GLDNQ6ZMI3 551 aaPredicted RBP11.43□□□□□ -0.58
RPS28-201ENST00000417088 AHSA2Q719I0 299 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 LRRTM1Q86UE6 522 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 PACRGLQ8N7B6 248 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 TCTEX1D1Q8N7M0 179 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 NANOGP1Q8N7R0 232 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 ARPC1AQ92747 370 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 NICN1Q9BSH3 213 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 TM2D1Q9BX74 207 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 TMEM59Q9BXS4 323 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 PLCXD1Q9NUJ7 323 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 SLC23A1Q9UHI7 598 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 GAB2Q9UQC2 676 aa11.43□□□□□ -0.58
RPS28-201ENST00000417088 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 OR5H14A6NHG9 310 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 GNAO1P09471 354 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 FRMD6-AS1P0C7T7 363 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 MC5RP33032 325 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 TMEM267Q0VDI3 215 aaPredicted RBP11.42□□□□□ -0.58
RPS28-201ENST00000417088 UNC119Q13432 240 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 PLGLAQ15195 96 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 OR5AN1Q8NGI8 311 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 OR6Q1Q8NGQ2 317 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 FBLIM1Q8WUP2 373 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 ABHD14BQ96IU4 210 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 AGMATQ9BSE5 352 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 FAM103A1Q9BTL3 118 aaKnown RBP11.42□□□□□ -0.58
RPS28-201ENST00000417088 GHITMQ9H3K2 345 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 KCNK15Q9H427 330 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 CHMP1AQ9HD42 196 aaPredicted RBP11.42□□□□□ -0.58
RPS28-201ENST00000417088 C8orf4Q9NR00 106 aa11.42□□□□□ -0.58
RPS28-201ENST00000417088 TRIM64CA6NLI5 447 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 RBBP9O75884 186 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 IGHV3-11P01762 117 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 GSTP1P09211 210 aaKnown RBP11.41□□□□□ -0.58
RPS28-201ENST00000417088 CD37P11049 281 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 SNRPBP14678 240 aaKnown RBP11.41□□□□□ -0.58
RPS28-201ENST00000417088 QRFPP83859 136 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 AKIRIN2Q53H80 203 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 GLT8D1Q68CQ7 371 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 UNQ5815/PRO19632Q6UWF5 114 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 C8orf59Q8N0T1 100 aaPredicted RBP11.41□□□□□ -0.58
RPS28-201ENST00000417088 BPIFB6Q8NFQ5 453 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 KCNG3Q8TAE7 436 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 SETD6Q8TBK2 473 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 ABHD5Q8WTS1 349 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 RHOVQ96L33 236 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 MS4A10Q96PG2 267 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 CLCC1Q96S66 551 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 FKBP14Q9NWM8 211 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 RNF150Q9ULK6 438 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 WASHC3Q9Y3C0 194 aa11.41□□□□□ -0.58
RPS28-201ENST00000417088 A0A0A6YYD4 124 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 TRBV6-6A0A0A6YYG2 114 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 H7C2Y5 167 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 ITGB1BP1O14713 200 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 SLC22A1O15245 554 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 PROP1O75360 226 aa11.4□□□□□ -0.58
RPS28-201ENST00000417088 HSPB1P04792 205 aaKnown RBP11.4□□□□□ -0.58
RPS28-201ENST00000417088 OR8U9P0C7N5 309 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms