RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 OR3A1P47881 315 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 SELENOVP59797 346 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 TRAT1Q6PIZ9 186 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 LYZL2Q7Z4W2 148 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 C5orf24Q7Z6I8 188 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 LRP11Q86VZ4 500 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 OR5D13Q8NGL4 314 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 AKR1E2Q96JD6 320 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 TOLLIPQ9H0E2 274 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 UFSP2Q9NUQ7 469 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 KCNIP1Q9NZI2 227 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 UBE2J1Q9Y385 318 aaPredicted RBP14.23□□□□□ -0.13
PTPRC-206ENST00000413409 TRRAPQ9Y4A5 3859 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 IGHV3-64DA0A0J9YX35 117 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 TAAR5O14804 337 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 TPT1P13693 172 aaKnown RBP14.22□□□□□ -0.13
PTPRC-206ENST00000413409 PTAFRP25105 342 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 MSMO1Q15800 293 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 TMEM268Q5VZI3 342 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 TMEM108Q6UXF1 575 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 SLC35G3Q8N808 338 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 NEUROG1Q92886 237 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 C1orf159Q96HA4 380 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 PLEKHA2Q9HB19 425 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 TAF9BQ9HBM6 251 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 CCL28Q9NRJ3 127 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 OR1A1Q9P1Q5 309 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 DUSP13Q9UII6 198 aa14.22□□□□□ -0.13
PTPRC-206ENST00000413409 OOEPA6NGQ2 149 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 MSGN1A6NI15 193 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 E5RGE8 158 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 K7EPK0 472 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 HSD17B6O14756 317 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 CEBPDP49716 269 aaPredicted RBP14.21□□□□□ -0.13
PTPRC-206ENST00000413409 EIF5AP63241 154 aaKnown RBP14.21□□□□□ -0.13
PTPRC-206ENST00000413409 ADAM5Q6NVV9 412 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 PDZD9Q8IXQ8 264 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 SELENOHQ8IZQ5 122 aaKnown RBP14.21□□□□□ -0.13
PTPRC-206ENST00000413409 FAM71E2Q8N5Q1 922 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 OR4D5Q8NGN0 318 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 COQ2Q96H96 371 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 CITED4Q96RK1 184 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 DNTTIP1Q9H147 329 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 CYTL1Q9NRR1 136 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 NSG2Q9Y328 171 aa14.21□□□□□ -0.13
PTPRC-206ENST00000413409 PGLYRP1O75594 196 aaPredicted RBP14.2□□□□□ -0.14
PTPRC-206ENST00000413409 MBPP02686 304 aaPredicted RBP14.2□□□□□ -0.14
PTPRC-206ENST00000413409 ZNF16P17020 682 aaPredicted RBP14.2□□□□□ -0.14
PTPRC-206ENST00000413409 F2RP25116 425 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 COL10A1Q03692 680 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 C12orf54Q6X4T0 127 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 WFDC8Q8IUA0 241 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 ZNF695Q8IW36 515 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 FAM216AQ8WUB2 273 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 IL1F10Q8WWZ1 152 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 RBPMSQ93062 196 aaKnown RBP14.2□□□□□ -0.14
PTPRC-206ENST00000413409 OR2V2Q96R30 315 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 POMT1Q9Y6A1 747 aa14.2□□□□□ -0.14
PTPRC-206ENST00000413409 C12orf77C9JDV5 145 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 HSPA12AO43301 675 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 HKR1P10072 659 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 LOXL1Q08397 574 aaPredicted RBP14.19□□□□□ -0.14
PTPRC-206ENST00000413409 PDLIM3Q53GG5 364 aaPredicted RBP14.19□□□□□ -0.14
PTPRC-206ENST00000413409 NMSQ5H8A3 153 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 ALKBH2Q6NS38 261 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 PPP1R35Q8TAP8 253 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 LRRC20Q8TCA0 184 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 ERGIC1Q969X5 290 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 MRPL37Q9BZE1 423 aaKnown RBP14.19□□□□□ -0.14
PTPRC-206ENST00000413409 PFDN2Q9UHV9 154 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 ZDHHC8Q9ULC8 765 aa14.19□□□□□ -0.14
PTPRC-206ENST00000413409 LSM5Q9Y4Y9 91 aaKnown RBP14.19□□□□□ -0.14
PTPRC-206ENST00000413409 ST8SIA3O43173 380 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 ZNF737O75373 536 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 GAPDHP04406 335 aaKnown RBP14.18□□□□□ -0.14
PTPRC-206ENST00000413409 IGHV4-31P0DP07 118 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 PSG2P11465 335 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 SLC25A6P12236 298 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 VDAC1P21796 283 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 TNFSF4P23510 183 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 RPL12P30050 165 aaKnown RBP14.18□□□□□ -0.14
PTPRC-206ENST00000413409 PRDX2P32119 198 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 FAM120AOSQ5T036 256 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 CYB5R2Q6BCY4 276 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 VHLLQ6RSH7 139 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 BAP18Q8IXM2 172 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 GCSAMQ8N6F7 178 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 CD177Q8N6Q3 437 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.18□□□□□ -0.14
PTPRC-206ENST00000413409 ZBTB34Q8NCN2 500 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 Q8TCH9 128 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 PCNPQ8WW12 178 aaKnown RBP14.18□□□□□ -0.14
PTPRC-206ENST00000413409 ITLN1Q8WWA0 313 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 LIN7CQ9NUP9 197 aaKnown RBP14.18□□□□□ -0.14
PTPRC-206ENST00000413409 IL19Q9UHD0 177 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 CADP27708 2225 aa14.18□□□□□ -0.14
PTPRC-206ENST00000413409 TRAV39A0A0B4J263 110 aa14.17□□□□□ -0.14
PTPRC-206ENST00000413409 SCGB1D2O95969 90 aa14.17□□□□□ -0.14
PTPRC-206ENST00000413409 LHBP01229 141 aa14.17□□□□□ -0.14
PTPRC-206ENST00000413409 ADH4P08319 380 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms