RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RTN4IP1Q8WWV3 396 aaPredicted RBP15.44■□□□□ 0.06
HOXA9-202ENST00000396345 AGMATQ9BSE5 352 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 MMP27Q9H306 513 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 PIPOXQ9P0Z9 390 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 TCF19Q9Y242 345 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 COL6A5A8TX70 2615 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 IGHV1-3A0A0C4DH29 117 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 SULT1C2O00338 296 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 TXNL1O43396 289 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 LANCL1O43813 399 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 CD24P25063 80 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 OR3A3P47888 321 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 H1FOOQ8IZA3 346 aaPredicted RBP15.43■□□□□ 0.06
HOXA9-202ENST00000396345 CAPSLQ8WWF8 208 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 SNAPC3Q92966 411 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 ABHD14BQ96IU4 210 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 ABHD1Q96SE0 405 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 GHITMQ9H3K2 345 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 PITPNC1Q9UKF7 332 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 RNF150Q9ULK6 438 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 ANAPC10Q9UM13 185 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 A3GALT2U3KPV4 340 aa15.43■□□□□ 0.06
HOXA9-202ENST00000396345 SAA2-SAA4A0A096LPE2 208 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 A6NDX4 124 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 RAB29O14966 203 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 CRYBA1P05813 215 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 SAA2P0DJI9 122 aaPredicted RBP15.42■□□□□ 0.06
HOXA9-202ENST00000396345 TNFSF8P32971 234 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 LIAT1Q6ZQX7 453 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 ZNF833PQ6ZTB9 187 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 OR56B4Q8NH76 319 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 CFHR4Q92496 578 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 S1PR3Q99500 378 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 C19orf24Q9BVV8 132 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 NECAP2Q9NVZ3 263 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 RABL2AQ9UBK7 228 aaPredicted RBP15.42■□□□□ 0.06
HOXA9-202ENST00000396345 ZNF221Q9UK13 617 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 RABL2BQ9UNT1 228 aa15.42■□□□□ 0.06
HOXA9-202ENST00000396345 FAM90A9PA6NNJ1 464 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 OR8U9P0C7N5 309 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 NAT1P18440 290 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 NFYAP23511 347 aaPredicted RBP15.41■□□□□ 0.06
HOXA9-202ENST00000396345 GPR12P47775 334 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 RPL15P61313 204 aaKnown RBP15.41■□□□□ 0.06
HOXA9-202ENST00000396345 ACTG1P63261 375 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 IL18Q14116 193 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 RNASE12Q5GAN4 147 aaKnown RBP15.41■□□□□ 0.06
HOXA9-202ENST00000396345 CCBE1Q6UXH8 406 aaPredicted RBP15.41■□□□□ 0.06
HOXA9-202ENST00000396345 TMEM219Q86XT9 240 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 THNSL2Q86YJ6 484 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 OR5AP2Q8NGF4 316 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 OR8U1Q8NH10 309 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 RAB18Q9NP72 206 aa15.41■□□□□ 0.06
HOXA9-202ENST00000396345 RBM7Q9Y580 266 aaKnown RBP15.41■□□□□ 0.06
HOXA9-202ENST00000396345 SNRNP70P08621 437 aaKnown RBP15.4■□□□□ 0.06
HOXA9-202ENST00000396345 FAM106CPP0CH98 169 aa15.4■□□□□ 0.06
HOXA9-202ENST00000396345 S100A5P33763 92 aa15.4■□□□□ 0.06
HOXA9-202ENST00000396345 HABP2Q14520 560 aaPredicted RBP15.4■□□□□ 0.06
HOXA9-202ENST00000396345 CDK10Q15131 360 aa15.4■□□□□ 0.06
HOXA9-202ENST00000396345 RPL39P5Q59GN2 51 aa15.4■□□□□ 0.06
HOXA9-202ENST00000396345 DHRS7BQ6IAN0 325 aaPredicted RBP15.4■□□□□ 0.06
HOXA9-202ENST00000396345 PYHIN1Q6K0P9 492 aa15.4■□□□□ 0.06
HOXA9-202ENST00000396345 FAM71F2Q6NXP2 309 aa15.4■□□□□ 0.06
HOXA9-202ENST00000396345 OR52I2Q8NH67 350 aa15.4■□□□□ 0.06
HOXA9-202ENST00000396345 ZNF251Q9BRH9 671 aa15.4■□□□□ 0.06
HOXA9-202ENST00000396345 IGHV3-72A0A0B4J1Y9 119 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 A6NHS1 94 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 CHST1O43916 411 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 OR5H8P0DN80 308 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 RCVRNP35243 200 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 TAS2R46P59540 309 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 HES1Q14469 280 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 FCAMRQ8WWV6 532 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 MRPL20Q9BYC9 149 aaKnown RBP15.39■□□□□ 0.05
HOXA9-202ENST00000396345 OR2D2Q9H210 308 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 C1RLQ9NZP8 487 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 OR2W1Q9Y3N9 320 aa15.39■□□□□ 0.05
HOXA9-202ENST00000396345 FABP12A6NFH5 140 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 J3QRK9 145 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 IGKV1D-33P01593 117 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 IGKV1-33P01594 117 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 PMP2P02689 132 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 HKR1P10072 659 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 HLA-DMAP28067 261 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 CD1BP29016 333 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 FCGR2CP31995 323 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 LUMP51884 338 aaPredicted RBP15.38■□□□□ 0.05
HOXA9-202ENST00000396345 MRPS10P82664 201 aaKnown RBP15.38■□□□□ 0.05
HOXA9-202ENST00000396345 FBLN7Q53RD9 439 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 LYSMD2Q8IV50 215 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.38■□□□□ 0.05
HOXA9-202ENST00000396345 OR5H2Q8NGV7 314 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 TAF15Q92804 592 aaKnown RBP eCLIP15.38■□□□□ 0.05
HOXA9-202ENST00000396345 NABP2Q9BQ15 211 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 EHFQ9NZC4 300 aa15.38■□□□□ 0.05
HOXA9-202ENST00000396345 ZNF736B4DX44 427 aaPredicted RBP15.37■□□□□ 0.05
HOXA9-202ENST00000396345 GABARAPH6UMI1 98 aa15.37■□□□□ 0.05
HOXA9-202ENST00000396345 RBBP9O75884 186 aa15.37■□□□□ 0.05
HOXA9-202ENST00000396345 TUSC2O75896 110 aa15.37■□□□□ 0.05
HOXA9-202ENST00000396345 RFX2P48378 723 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms