RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 G6PC2Q9NQR9 355 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 C7orf66A4D0T2 115 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 TRACP01848 142 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 MFAP4P55083 255 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 PNKDQ8N490 385 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 FGF13Q92913 245 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 WDR54Q9H977 334 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 NDUFB4O95168 129 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 SMAD2Q15796 467 aaKnown RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 LTB4R2Q9NPC1 389 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 GLRX2Q9NS18 164 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 GKN1Q9NS71 199 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 CST6Q15828 149 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 TSPO2Q5TGU0 170 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 ZNF660Q6AZW8 331 aaPredicted RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 ZFP64Q9NPA5 681 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 STARD5Q9NSY2 213 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 PRDX1Q06830 199 aaKnown RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 OTPQ5XKR4 325 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 C15orf39Q6ZRI6 1047 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 HARBI1Q96MB7 349 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 PAXXQ9BUH6 204 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 CLEC5AQ9NY25 188 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 TRAV8-6A0A0B4J262 113 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 GGTLC3B5MD39 225 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 CXCL2P19875 107 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 ZNF252P-AS1Q0IIN9 211 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 OR10J3Q5JRS4 329 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 ZBTB34Q8NCN2 500 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 OR6X1Q8NH79 312 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 RHNO1Q9BSD3 238 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 TRAV9-2A0A087WT02 112 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 RBMY1BA6NDE4 496 aaKnown RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 RBMY1EA6NEQ0 496 aaKnown RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 DLEU1O43261 78 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 RBMY1DP0C7P1 496 aaKnown RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 RBMY1A1P0DJD3 496 aaKnown RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 RBMY1CP0DJD4 496 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 RRADP55042 308 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 FUT5Q11128 374 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 LINC01559Q495D7 138 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 CT83Q5H943 113 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 MORN3Q6PF18 240 aaPredicted RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 ZNF788Q6ZQV5 615 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 OR2Z1Q8NG97 314 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 ASB10Q8WXI3 467 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 MS4A8Q9BY19 250 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 LINC00470Q9BZP3 86 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 MMP25Q9NPA2 562 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 EPDR1Q9UM22 224 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 PRSS38A1L453 326 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 PPP6CO00743 305 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 UMODP07911 640 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 PTGER1P34995 402 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 TMEM155Q4W5P6 130 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 CD300LDQ6UXZ3 194 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 C1QL4Q86Z23 238 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 SFTPA2Q8IWL1 248 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 SFTPA1Q8IWL2 248 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 OR4X1Q8NH49 305 aa5.43□□□□□ -1.54
VCAN-203ENST00000343200 RAI1Q7Z5J4 1906 aaPredicted RBP5.43□□□□□ -1.54
VCAN-203ENST00000343200 H0YGG7 62 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 SNRPCP09234 159 aaKnown RBP5.42□□□□□ -1.54
VCAN-203ENST00000343200 EWSR1Q01844 656 aaKnown RBP eCLIP5.42□□□□□ -1.54
VCAN-203ENST00000343200 HSD52Q0P140 79 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 TMEM207Q6UWW9 146 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 BIVMQ86UB2 503 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 SLC6A13Q9NSD5 602 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 RABAC1Q9UI14 185 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 VSIG4Q9Y279 399 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BKO60814 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BJP06899 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BOP23527 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BBP33778 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 TMEM50BP56557 158 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BDP58876 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BCP62807 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 ATXN8Q156A1 80 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST2H2BEQ16778 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 DEFB110Q30KQ9 67 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.42□□□□□ -1.54
VCAN-203ENST00000343200 FAM182BQ5T319 152 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BHQ93079 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BNQ99877 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BMQ99879 126 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 CCL27Q9Y4X3 112 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 ASPDHA6ND91 283 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 DCAF10Q5QP82 559 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 DACT2Q5SW24 774 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 TTC9CQ8N5M4 171 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 ZNF441Q8N8Z8 693 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 OR9G4Q8NGQ1 327 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 PGLYRP4Q96LB8 373 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 PRNDQ9UKY0 176 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 WNT6Q9Y6F9 365 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 SRD5A2P31213 254 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 FAM110CQ1W6H9 321 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 SLC16A11Q8NCK7 471 aa5.42□□□□□ -1.54
VCAN-203ENST00000343200 MED29Q9NX70 200 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms