RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 SLURP1P55000 103 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 FAM27D1Q5T7N8 215 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 FAM131AQ6UXB0 335 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 C6orf201Q7Z4U5 140 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 ZNF429Q86V71 674 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 SBSPONQ8IVN8 264 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 NEDD4LQ96PU5 975 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 PARP12Q9H0J9 701 aaKnown RBP13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 CST11Q9H112 138 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 FBXL15Q9H469 300 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 TPSG1Q9NRR2 321 aa13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 CNOT2Q9NZN8 540 aaKnown RBP13.5□□□□□ -0.25
EXOSC4-201ENST00000316052 SNRPBP14678 240 aaKnown RBP13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 CRIP2P52943 208 aaPredicted RBP13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 AQP4P55087 323 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 WNT4P56705 351 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 RPS27AP62979 156 aaKnown RBP13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 CX3CL1P78423 397 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 ECSCRQ19T08 205 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 RPL39P5Q59GN2 51 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 AHSA2Q719I0 299 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 LRRTM1Q86UE6 522 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 NANOGP1Q8N7R0 232 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 IL1F10Q8WWZ1 152 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 NICN1Q9BSH3 213 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 TOLLIPQ9H0E2 274 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 KCNK15Q9H427 330 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 ISYNA1Q9NPH2 558 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 KIAA1456Q9P272 454 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 NUBP2Q9Y5Y2 271 aa13.49□□□□□ -0.25
EXOSC4-201ENST00000316052 CSMD3Q7Z407 3707 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 A0A1W2PN81 502 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 RRHO14718 337 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 NAPSAO96009 420 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 SPNP16150 400 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 MAPK3P27361 379 aaPredicted RBP13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 CHRNA7P36544 502 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 UNC119Q13432 240 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 ACSM3Q53FZ2 586 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 C1orf100Q5SVJ3 147 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 ZNF660Q6AZW8 331 aaPredicted RBP13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 ZNF880Q6PDB4 577 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 GLDNQ6ZMI3 551 aaPredicted RBP13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 OVCH2Q7RTZ1 564 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 GAB2Q9UQC2 676 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 FOXA2Q9Y261 457 aaPredicted RBP13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 A3GALT2U3KPV4 340 aa13.48□□□□□ -0.25
EXOSC4-201ENST00000316052 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 A0A087WW49 117 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 LINC01619G3V211 115 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 MYL12BO14950 172 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 RAB29O14966 203 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 SAP30O75446 220 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 UBBP0CG47 229 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 QRFPP83859 136 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 FAM71F2Q6NXP2 309 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 SVOPQ8N4V2 548 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 BPIFB6Q8NFQ5 453 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 FBLIM1Q8WUP2 373 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 ABHD14BQ96IU4 210 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 LYSTQ99698 3801 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 AGMATQ9BSE5 352 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 TMEM59Q9BXS4 323 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 PLCXD1Q9NUJ7 323 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 FKBP14Q9NWM8 211 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 PIPOXQ9P0Z9 390 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 ABRACLQ9P1F3 81 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 STEAP1Q9UHE8 339 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 SLC23A1Q9UHI7 598 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 ERGIC3Q9Y282 383 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 TNCP24821 2201 aa13.47□□□□□ -0.25
EXOSC4-201ENST00000316052 A0A0A6YYD4 124 aa13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 H0YJW9 148 aa13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 LGALS1P09382 135 aaKnown RBP13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 CD37P11049 281 aa13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 ACSM6Q6P461 480 aa13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 C8orf59Q8N0T1 100 aaPredicted RBP13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 THRSPQ92748 146 aa13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 RCHY1Q96PM5 261 aa13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 FAM103A1Q9BTL3 118 aaKnown RBP13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 TM2D1Q9BX74 207 aa13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 STARD9Q9P2P6 4700 aa13.46□□□□□ -0.25
EXOSC4-201ENST00000316052 PROP1O75360 226 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 IGHV3-11P01762 117 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 GP9P14770 177 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 LINC00205P59089 165 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 GLT8D1Q68CQ7 371 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 CD200R1LQ6Q8B3 271 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 PPP1R27Q86WC6 154 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 OR5AN1Q8NGI8 311 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 KCNG3Q8TAE7 436 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 MUC7Q8TAX7 377 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 SETD6Q8TBK2 473 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 ARPC1AQ92747 370 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 CLCC1Q96S66 551 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 TMED9Q9BVK6 235 aa13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 CHMP1AQ9HD42 196 aaPredicted RBP13.45□□□□□ -0.26
EXOSC4-201ENST00000316052 OR5H14A6NHG9 310 aa13.44□□□□□ -0.26
EXOSC4-201ENST00000316052 TRIM64CA6NLI5 447 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms