RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PTTG2Q9NZH5 202 aa14.47□□□□□ -0.09
SSSCA1-201ENST00000309328 ZNF221Q9UK13 617 aa14.47□□□□□ -0.09
SSSCA1-201ENST00000309328 GAB2Q9UQC2 676 aa14.47□□□□□ -0.09
SSSCA1-201ENST00000309328 OR2W1Q9Y3N9 320 aa14.47□□□□□ -0.09
SSSCA1-201ENST00000309328 JMJD1CQ15652 2540 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 OR5H8P0DN80 308 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 UTF1Q5T230 341 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 TGIF2LXQ8IUE1 241 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 OR52I2Q8NH67 350 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 GCDHQ92947 438 aaPredicted RBP14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 BORCS5Q969J3 196 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 SSX3Q99909 188 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 AGMATQ9BSE5 352 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 IFI27L2Q9H2X8 130 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 VPREB3Q9UKI3 123 aa14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 RBM7Q9Y580 266 aaKnown RBP14.46□□□□□ -0.09
SSSCA1-201ENST00000309328 MDFIC2A0A1B0GVS7 189 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 A0A1W2PPE3 182 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 MEIS3P1A6NDR6 274 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 DNAJC9-AS1A6NH13 148 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 ZNF736B4DX44 427 aaPredicted RBP14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 SLC31A2O15432 143 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 HOXA3O43365 443 aaPredicted RBP14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 TUSC2O75896 110 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 RNASE1P07998 156 aaKnown RBP14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 CSF1P09603 554 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 GPR12P47775 334 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 LUMP51884 338 aaPredicted RBP14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 TAS2R19P59542 299 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 CNPY1Q3B7I2 92 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 LDLRAD2Q5SZI1 272 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 ZNF833PQ6ZTB9 187 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 OVCH2Q7RTZ1 564 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 THNSL2Q86YJ6 484 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 C17orf50Q8WW18 174 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 GIMAP1Q8WWP7 306 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 RTN4IP1Q8WWV3 396 aaPredicted RBP14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 DEDD2Q8WXF8 326 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 EHFQ9NZC4 300 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 RBMX2Q9Y388 322 aaKnown RBP14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 C2CD3Q4AC94 2353 aa14.45□□□□□ -0.1
SSSCA1-201ENST00000309328 ST8SIA5O15466 376 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 FAM106CPP0CH98 169 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 TAGLNQ01995 201 aaKnown RBP14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 ZNF45Q02386 682 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 DYRK1AQ13627 763 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 HABP2Q14520 560 aaPredicted RBP14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 SLC9A3R2Q15599 337 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 MSMO1Q15800 293 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 VAX1Q5SQQ9 334 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 C5orf24Q7Z6I8 188 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 TMEM17Q86X19 198 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 TMEM229BQ8NBD8 167 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 AKR1E2Q96JD6 320 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 KLK11Q9UBX7 282 aa14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 SOX21Q9Y651 276 aaPredicted RBP14.44□□□□□ -0.1
SSSCA1-201ENST00000309328 SAA2-SAA4A0A096LPE2 208 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 IGHV1-3A0A0C4DH29 117 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 A0A1W2PPI3 338 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 H3BUX3 64 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 IGHV4-59P01825 116 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 SAA2P0DJI9 122 aaPredicted RBP14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 FCGR2CP31995 323 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 HRH1P35367 487 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 AP3S2P59780 193 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 UBA52P62987 128 aaKnown RBP14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 PYDC2Q56P42 97 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 RNASE10Q5GAN6 216 aaKnown RBP14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 DHRS11Q6UWP2 260 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 C16orf82Q7Z2V1 217 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 ODF3L1Q8IXM7 274 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 DYNAPQ8N1N2 210 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 ARRDC1Q8N5I2 433 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 ZDHHC22Q8N966 263 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 V9GYH0 126 aa14.43□□□□□ -0.1
SSSCA1-201ENST00000309328 IFNA6P05013 189 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 OR8U9P0C7N5 309 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 NFYAP23511 347 aaPredicted RBP14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 HLA-DMAP28067 261 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 CD1BP29016 333 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 HERV-K104P61576 105 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 DGCR2P98153 550 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 MEF2DQ14814 521 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 FAM53AQ6NSI3 398 aaPredicted RBP14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 C16orf87Q6PH81 154 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 LYSMD2Q8IV50 215 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 Q8N402 240 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 GDPD1Q8N9F7 314 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 OR6F1Q8NGZ6 308 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 OR8U1Q8NH10 309 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 S100ZQ8WXG8 99 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 ADTRPQ96IZ2 230 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 OR2D2Q9H210 308 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 TCF19Q9Y242 345 aa14.42□□□□□ -0.1
SSSCA1-201ENST00000309328 OR5H14A6NHG9 310 aa14.41□□□□□ -0.1
SSSCA1-201ENST00000309328 FAM90A9PA6NNJ1 464 aa14.41□□□□□ -0.1
SSSCA1-201ENST00000309328 M0QZK8 103 aa14.41□□□□□ -0.1
SSSCA1-201ENST00000309328 TIMM23O14925 209 aa14.41□□□□□ -0.1
SSSCA1-201ENST00000309328 VENTXO95231 258 aa14.41□□□□□ -0.1
SSSCA1-201ENST00000309328 PPYP01298 95 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms