RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DTYMKP23919 212 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 VDAC2P45880 294 aaPredicted RBP5.24□□□□□ -1.57
CD44-204ENST00000279452 TAS2R20P59543 309 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 HABP2Q14520 560 aaPredicted RBP5.24□□□□□ -1.57
CD44-204ENST00000279452 SPCS2Q15005 226 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 HERPUD1Q15011 391 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 ABCA11PQ4W5N1 156 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 RPL39P5Q59GN2 51 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 SNX29P2Q8IUI4 249 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 OR2T10Q8NGZ9 312 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 OR8U1Q8NH10 309 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 MRPL20Q9BYC9 149 aaKnown RBP5.24□□□□□ -1.57
CD44-204ENST00000279452 PRSS22Q9GZN4 317 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 OR2D2Q9H210 308 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 IFI27L2Q9H2X8 130 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 RANBP3Q9H6Z4 567 aaPredicted RBP5.24□□□□□ -1.57
CD44-204ENST00000279452 AUNIPQ9H7T9 357 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.24□□□□□ -1.57
CD44-204ENST00000279452 PIPOXQ9P0Z9 390 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 MOB4Q9Y3A3 225 aa5.24□□□□□ -1.57
CD44-204ENST00000279452 ANK3Q12955 4377 aaKnown RBP5.24□□□□□ -1.57
CD44-204ENST00000279452 IGKV1D-8A0A087WSZ0 117 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 IGKV1-6A0A0C4DH72 117 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 ZNF736B4DX44 427 aaPredicted RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 H3BMQ9 156 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 M0QZK8 103 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 M0R1X1 148 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 XRCC3O43542 346 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 LANCL1O43813 399 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 SSX5O60225 188 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 MOSP00540 346 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 ELK1P19419 428 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 NFYAP23511 347 aaPredicted RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 PRSS3P35030 304 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 CBX5P45973 191 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 COMPP49747 757 aaPredicted RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 TMBIM6P55061 237 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 BLCAPP62952 87 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 SRSF4Q08170 494 aaKnown RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 LSAMPQ13449 338 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 PLGLAQ15195 96 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 MMDQ15546 238 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 TMEM95Q3KNT9 176 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 FBLN7Q53RD9 439 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 SHISA2Q6UWI4 295 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 FAM131AQ6UXB0 335 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 GLDNQ6ZMI3 551 aaPredicted RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 ZNF833PQ6ZTB9 187 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 C16orf82Q7Z2V1 217 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 KLHDC1Q8N7A1 406 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 GVQW1Q8N7I0 195 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 C11orf44Q8N8P7 122 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 DRAXINQ8NBI3 349 aaPredicted RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 BEST4Q8NFU0 473 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 WFDC12Q8WWY7 111 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 CFHR4Q92496 578 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 ISOC1Q96CN7 298 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 RBMXL1Q96E39 390 aaKnown RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 RBM14Q96PK6 669 aaKnown RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 CABLES2Q9BTV7 478 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 C6orf62Q9GZU0 229 aaPredicted RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 C11orf54Q9H0W9 315 aaPredicted RBP5.23□□□□□ -1.57
CD44-204ENST00000279452 ABCG5Q9H222 651 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 ZNF702PQ9H963 129 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 EXTL2Q9UBQ6 330 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 ANXA10Q9UJ72 324 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 ADAM30Q9UKF2 790 aa5.23□□□□□ -1.57
CD44-204ENST00000279452 SETD2Q9BYW2 2564 aaPredicted RBP5.22□□□□□ -1.57
CD44-204ENST00000279452 WNK2Q9Y3S1 2297 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 DOCK11Q5JSL3 2073 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 TRBV6-7A0A0A0MS04 114 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 TSPAN9O75954 239 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 DIRAS3O95661 229 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 APOA1P02647 267 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 APOA2P02652 100 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 CTXN2P0C2S0 81 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 CD1BP29016 333 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 LUMP51884 338 aaPredicted RBP5.22□□□□□ -1.57
CD44-204ENST00000279452 ZNF137PP52743 207 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 FXYD4P59646 89 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 CBX3Q13185 183 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 KHDC1LQ5JSQ8 128 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 CNIH2Q6PI25 160 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 THNSL2Q86YJ6 484 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 LAX1Q8IWV1 398 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 ODF3L1Q8IXM7 274 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 ST6GALNAC6Q969X2 333 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 EAF1Q96JC9 268 aaPredicted RBP5.22□□□□□ -1.57
CD44-204ENST00000279452 RASL11BQ9BPW5 248 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 NABP2Q9BQ15 211 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 BCL7BQ9BQE9 202 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 ZNF251Q9BRH9 671 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 DCUN1D5Q9BTE7 237 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 ZNF747Q9BV97 191 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 C16orf95Q9H693 158 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 NECAP2Q9NVZ3 263 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 CCDC59Q9P031 241 aaKnown RBP5.22□□□□□ -1.57
CD44-204ENST00000279452 KIAA1456Q9P272 454 aa5.22□□□□□ -1.57
CD44-204ENST00000279452 WASHC3Q9Y3C0 194 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms