RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 A0A1W2PPE3 182 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 A0A1W2PRD5 423 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 A0A1W2PRF3 423 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 RAB29O14966 203 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 TXNL1O43396 289 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 FCER2P06734 321 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 CD40LGP29965 261 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 RFX2P48378 723 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 HABP2Q14520 560 aaPredicted RBP11.4□□□□□ -0.58
VPS25-201ENST00000253794 DEFB112Q30KQ8 113 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 STEAP1BQ6NZ63 245 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 ZNF833PQ6ZTB9 187 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 DYNAPQ8N1N2 210 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 C17orf50Q8WW18 174 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 SLC6A7Q99884 636 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 ZNF251Q9BRH9 671 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 CCDC32Q9BV29 185 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 EHFQ9NZC4 300 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 SOX21Q9Y651 276 aaPredicted RBP11.4□□□□□ -0.58
VPS25-201ENST00000253794 CUBNO60494 3623 aa11.4□□□□□ -0.58
VPS25-201ENST00000253794 HSD17B6O14756 317 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 ST8SIA5O15466 376 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 SLC22A5O76082 557 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 PPYP01298 95 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 PMP2P02689 132 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 AKAIN1P0CW23 69 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 NFYAP23511 347 aaPredicted RBP11.39□□□□□ -0.59
VPS25-201ENST00000253794 FCGR2CP31995 323 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 PPP5CP53041 499 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 AP3S2P59780 193 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 KLF9Q13886 244 aaPredicted RBP11.39□□□□□ -0.59
VPS25-201ENST00000253794 MEF2DQ14814 521 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 RNASE10Q5GAN6 216 aaKnown RBP11.39□□□□□ -0.59
VPS25-201ENST00000253794 CCDC144NLQ6NUI1 221 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 Q6YL49 198 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 LHFPL1Q86WI0 220 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 LURAP1LQ8IV03 231 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 OR8H3Q8N146 312 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 RTN4IP1Q8WWV3 396 aaPredicted RBP11.39□□□□□ -0.59
VPS25-201ENST00000253794 WDR12Q9GZL7 423 aaKnown RBP11.39□□□□□ -0.59
VPS25-201ENST00000253794 FAM96BQ9Y3D0 163 aa11.39□□□□□ -0.59
VPS25-201ENST00000253794 SAA2-SAA4A0A096LPE2 208 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 A0A0A6YYJ9 748 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 IGKV1D-13A0A0B4J2D9 117 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 A0A1W2PPI3 338 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 PROP1O75360 226 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 RAB3DO95716 219 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 GAPDHP04406 335 aaKnown RBP11.38□□□□□ -0.59
VPS25-201ENST00000253794 OR8U9P0C7N5 309 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 ZNF735P0CB33 412 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 SAA2P0DJI9 122 aaPredicted RBP11.38□□□□□ -0.59
VPS25-201ENST00000253794 IGKV1-13P0DP09 117 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 AADACP22760 399 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 LUMP51884 338 aaPredicted RBP11.38□□□□□ -0.59
VPS25-201ENST00000253794 LSAMPQ13449 338 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 SSX2Q16385 188 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 BAK1Q16611 211 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 TMEM86BQ8N661 226 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 ZNF645Q8N7E2 425 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 OR6F1Q8NGZ6 308 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 OR8U1Q8NH10 309 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 C22orf15Q8WYQ4 148 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 TOMM40LQ969M1 308 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 RPEQ96AT9 228 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 MOB3AQ96BX8 217 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 TINAGL1Q9GZM7 467 aaPredicted RBP11.38□□□□□ -0.59
VPS25-201ENST00000253794 SLC2A8Q9NY64 477 aa11.38□□□□□ -0.59
VPS25-201ENST00000253794 SETD2Q9BYW2 2564 aaPredicted RBP11.38□□□□□ -0.59
VPS25-201ENST00000253794 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 CLDN34H7C241 214 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 M0QYG6 137 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 IL7P13232 177 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 IER3P46695 156 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 ARHGDIBP52566 201 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 UCP3P55916 312 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 DIAPH2-AS1Q14236 149 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 ZNF846Q147U1 533 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 PLA1AQ53H76 456 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 AADACL3Q5VUY0 350 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 TMEM17Q86X19 198 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 TOMM5Q8N4H5 51 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 SIGLECL1Q8N7X8 197 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 OR4D10Q8NGI6 311 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 OR4C16Q8NGL9 310 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
VPS25-201ENST00000253794 CFHR4Q92496 578 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 ABHD14BQ96IU4 210 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 S1PR3Q99500 378 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 ZNF2Q9BSG1 426 aaPredicted RBP11.37□□□□□ -0.59
VPS25-201ENST00000253794 OR2D2Q9H210 308 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 ZNF221Q9UK13 617 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 HILPDAQ9Y5L2 63 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 POMT1Q9Y6A1 747 aa11.37□□□□□ -0.59
VPS25-201ENST00000253794 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 MDFIC2A0A1B0GVS7 189 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 GPR12P47775 334 aa11.36□□□□□ -0.59
VPS25-201ENST00000253794 HILS1P60008 231 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms