RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CLN8Q9UBY8 286 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 METRNQ9UJH8 293 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 KCNS2Q9ULS6 477 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 KLF2Q9Y5W3 355 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-215ENST00000641371 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 FAM208BQ5VWN6 2430 aa8.1□□□□□ -1.11
PHGDH-215ENST00000641371 IGKV1D-13A0A0B4J2D9 117 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 CLEC18AA5D8T8 446 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 CCSO14618 274 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 TMPRSS2O15393 492 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 RP2O75695 350 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 GYPAP02724 150 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 CGB3P0DN86 165 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 CGB7P0DN87 165 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 IGKV1-13P0DP09 117 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 MMP9P14780 707 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 IGFBP2P18065 325 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 PVALBP20472 110 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-215ENST00000641371 KIR2DS2P43631 304 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 ARHGDIBP52566 201 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 EIF5AP63241 154 aaKnown RBP8.09□□□□□ -1.11
PHGDH-215ENST00000641371 LGALSLQ3ZCW2 172 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-215ENST00000641371 SPRNQ5BIV9 151 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 GGNBP1Q5YKI7 109 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 CLEC18CQ8NCF0 446 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 ZNRF1Q8ND25 227 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 OR1L1Q8NH94 360 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 LSM10Q969L4 123 aaKnown RBP8.09□□□□□ -1.11
PHGDH-215ENST00000641371 WDR89Q96FK6 387 aaPredicted RBP8.09□□□□□ -1.11
PHGDH-215ENST00000641371 ADTRPQ96IZ2 230 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 TNFSF18Q9UNG2 199 aa8.09□□□□□ -1.11
PHGDH-215ENST00000641371 TRAV14DV4A0A0A6YYC5 116 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 A0A1B0GU03 582 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 TAAR5O14804 337 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 ARPC5O15511 151 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 SIAH2O43255 324 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 ADAM20O43506 726 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 ADAP1O75689 374 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 LY86O95711 162 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 PLAUP00749 431 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 OR8U9P0C7N5 309 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 DAOP14920 347 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 IL15RAQ13261 267 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 OPCMLQ14982 345 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 TMEM155Q4W5P6 130 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 MORN2Q502X0 79 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 TMEM268Q5VZI3 342 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 C11orf71Q6IPW1 123 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 SLC51BQ86UW2 128 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 KCNRGQ8N5I3 272 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 DRAM1Q8N682 238 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 DEFB108BQ8NET1 73 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 OR8U1Q8NH10 309 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 NEUROG1Q92886 237 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 RAB1CQ92928 201 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 SEC22AQ96IW7 307 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 TP53RKQ96S44 253 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 CCL13Q99616 98 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 ARL6Q9H0F7 186 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 OR2D2Q9H210 308 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 PLEKHA2Q9HB19 425 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 GFOD1Q9NXC2 390 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 IDI2-AS1Q9NZ38 188 aa8.08□□□□□ -1.12
PHGDH-215ENST00000641371 SETXQ7Z333 2677 aaKnown RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 SPTBN1Q01082 2364 aaKnown RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 ROS1P08922 2347 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 PKDREJQ9NTG1 2253 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 A0A1B0GW55 424 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 E5RGE8 158 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 TNFRSF13BO14836 293 aaPredicted RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 ST8SIA3O43173 380 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 RBFOX2O43251 390 aaKnown RBP eCLIP8.07□□□□□ -1.127e-8■■□□□ 12.4
PHGDH-215ENST00000641371 RBP4P02753 201 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 DUX4L2P0CJ85 424 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 DUX4L3P0CJ86 424 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 DUX4L4P0CJ87 422 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 DUX4L5P0CJ88 424 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 DUX4L6P0CJ89 424 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 DUX4L7P0CJ90 424 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 NDUFB7P17568 137 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 SSTR5P35346 364 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 GPR12P47775 334 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 UQCRFS1P47985 274 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 AP2S1P53680 142 aaPredicted RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 RPL31P62899 125 aaKnown RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 UBA52P62987 128 aaKnown RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 IFITM2Q01629 132 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 TAGLNQ01995 201 aaKnown RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 GNMTQ14749 295 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 CDSNQ15517 529 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 SP6Q3SY56 376 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 FAM71F2Q6NXP2 309 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 MEX3BQ6ZN04 569 aaKnown RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 TMUB2Q71RG4 321 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 SELENOHQ8IZQ5 122 aaKnown RBP8.07□□□□□ -1.12
PHGDH-215ENST00000641371 FAM71E2Q8N5Q1 922 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 SLC35G3Q8N808 338 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 C8orf31Q8N9H6 132 aa8.07□□□□□ -1.12
PHGDH-215ENST00000641371 RRNAD1Q96FB5 475 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms