RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 HIST1H2BMQ99879 126 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 NMNAT2Q9BZQ4 307 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 CHRNA10Q9GZZ6 450 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 NTMQ9P121 344 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 JPT1Q9UK76 154 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 TMEM129A0AVI4 362 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 OR4C46A6NHA9 309 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 PTHP01270 115 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 SOD3P08294 240 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 SEC11BP0C7V7 166 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 LAMP1P11279 417 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 CRISP2P16562 243 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 ZNF43P17038 809 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 ADRA2CP18825 462 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 ID1P41134 155 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 OC90Q02509 493 aaPredicted RBP4.9□□□□□ -1.63
EBF1-211ENST00000622875 PRRT3Q5FWE3 981 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 AADACL3Q5VUY0 350 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 OTPQ5XKR4 325 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 PLXDC2Q6UX71 529 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 Q6ZVU0 165 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 ZNF611Q8N823 705 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 FAM213BQ8TBF2 198 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 GLYATL1Q969I3 302 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 FUBP1Q96AE4 644 aaKnown RBP4.9□□□□□ -1.63
EBF1-211ENST00000622875 DNAJA3Q96EY1 480 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 TRMT61AQ96FX7 289 aaKnown RBP4.9□□□□□ -1.63
EBF1-211ENST00000622875 NUDT22Q9BRQ3 303 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 LMF2Q9BU23 707 aaKnown RBP4.9□□□□□ -1.63
EBF1-211ENST00000622875 NPFFR1Q9GZQ6 430 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 PARLQ9H300 379 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 AKTIPQ9H8T0 292 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 WSB1Q9Y6I7 421 aa4.9□□□□□ -1.63
EBF1-211ENST00000622875 A0A1W2PQU0 124 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 SMIM9A6NGZ8 99 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 XRCC3O43542 346 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 MARCKSL1P49006 195 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 MEF2BQ02080 365 aaPredicted RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 EFEMP1Q12805 493 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ZNF79Q15937 498 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 LRRC75BQ2VPJ9 315 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 CTU2Q2VPK5 515 aaKnown RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 ZNF550Q7Z398 422 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 SGPP2Q8IWX5 399 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 SYS1Q8N2H4 156 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 PTGR2Q8N8N7 351 aaPredicted RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 STAG3L4Q8TBR4 150 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 OR51E1Q8TCB6 317 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 MBOAT4Q96T53 435 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ELOVL3Q9HB03 270 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 TMEM242Q9NWH2 141 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 MCTS1Q9ULC4 181 aaKnown RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 TNFSF18Q9UNG2 199 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 TEX264Q9Y6I9 313 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 CMYA5Q8N3K9 4069 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 TRGV8A0A0C4DH27 118 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 A0A1W2PR48 441 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ZNF724A8MTY0 619 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ZNF727A8MUV8 499 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 NDUFS4O43181 175 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 OR2H2O95918 312 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ALOX5APP20292 161 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ECI1P42126 302 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ATP5J2P56134 94 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 CLDN2P57739 230 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 PITX1P78337 314 aaPredicted RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 ACSM2AQ08AH3 577 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 EXOSC7Q15024 291 aaKnown RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 ACSM2BQ68CK6 577 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 CT55Q8WUE5 264 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 TSLPQ969D9 159 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 LHX4Q969G2 390 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 MS4A5Q9H3V2 200 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 NEU3Q9UQ49 428 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 HRNRQ86YZ3 2850 aaPredicted RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 FAM24AA6NFZ4 105 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 GAPDHP04406 335 aaKnown RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 TACSTD2P09758 323 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ANKRD34CP0C6C1 535 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 MPGP29372 298 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 TGFBR1P36897 503 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 RPL27P61353 136 aaKnown RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 IL10RAQ13651 578 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 IL13RA2Q14627 380 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ZNF534Q76KX8 674 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ZNF433Q8N7K0 673 aaPredicted RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 C5orf17Q8NAS9 161 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 OR10AG1Q8NH19 301 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 RNF128Q8TEB7 428 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 NTNG2Q96CW9 530 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 NSUN5Q96P11 429 aaKnown RBP4.89□□□□□ -1.63
EBF1-211ENST00000622875 GABARAPL3Q9BY60 117 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ZNF442Q9H7R0 627 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 ZNF286AQ9HBT8 521 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 TMEM106BQ9NUM4 274 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 TVP23BQ9NYZ1 205 aa4.89□□□□□ -1.63
EBF1-211ENST00000622875 PPIAL4DF5H284 164 aa4.88□□□□□ -1.63
EBF1-211ENST00000622875 FGF16O43320 207 aa4.88□□□□□ -1.63
EBF1-211ENST00000622875 RENP00797 406 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms