RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ATP6V1G2-DDX39BF2Z307 99 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 CST7O76096 145 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 SPP1P10451 314 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 SSTR5P35346 364 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 CD200P41217 278 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 F2RL1P55085 397 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 EDDM3AQ14507 147 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 SMUG1Q53HV7 270 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 CISD2Q8N5K1 135 aaKnown RBP11.42□□□□□ -0.58
NEK3-205ENST00000610828 CD177Q8N6Q3 437 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 TMEM217Q8N7C4 229 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 FAM96BQ9Y3D0 163 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 SMG1Q96Q15 3661 aaKnown RBP11.41□□□□□ -0.58
NEK3-205ENST00000610828 SPRY3O43610 288 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 ADCYAP1P18509 176 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 PRDX2P32119 198 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 NKX6-1P78426 367 aaPredicted RBP11.41□□□□□ -0.58
NEK3-205ENST00000610828 ZNF266Q14584 549 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 ZNF585BQ52M93 769 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 Q6ZRM9 215 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 C22orf34Q6ZV56 151 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 ZNF645Q8N7E2 425 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 OR13A1Q8NGR1 328 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 TSNAXQ99598 290 aaKnown RBP11.41□□□□□ -0.58
NEK3-205ENST00000610828 CACNG5Q9UF02 275 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 RNF115Q9Y4L5 304 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 SRRM5B3KS81 715 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 F8W036 122 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 PRRG2O14669 202 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 PITX3O75364 302 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 ATG12O94817 140 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 SLC25A6P12236 298 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 PPP1CCP36873 323 aaKnown RBP11.41□□□□□ -0.58
NEK3-205ENST00000610828 ZNF616Q08AN1 781 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 SPRNQ5BIV9 151 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 BTNL8Q6UX41 500 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 SPACA3Q8IXA5 215 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 ZNF808Q8N4W9 903 aaPredicted RBP11.41□□□□□ -0.58
NEK3-205ENST00000610828 RFESDQ8TAC1 157 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 TMEM171Q8WVE6 324 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 LSM10Q969L4 123 aaKnown RBP11.41□□□□□ -0.58
NEK3-205ENST00000610828 SCNM1Q9BWG6 230 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 UQCC1Q9NVA1 299 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 SH3BGRL2Q9UJC5 107 aa11.41□□□□□ -0.58
NEK3-205ENST00000610828 IGHV3-43A0A0B4J1X8 118 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 RNF212BA8MTL3 300 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 IGKV1-5P01602 117 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 PRH1P02810 166 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 DANCRP0C864 163 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 IGHV3-43DP0DP04 118 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 MMP9P14780 707 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 MUC1P15941 1255 aaPredicted RBP11.4□□□□□ -0.58
NEK3-205ENST00000610828 FHITP49789 147 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 C3orf36Q3SXR2 165 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 MOGAT3Q86VF5 341 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 DOLPP1Q86YN1 238 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 IGKV1D-17A0A075B6S4 117 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 IGHV3OR15-7A0A075B7D8 119 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 H3BP45 60 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 C1QL1O75973 258 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 CAMLGP49069 296 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 PAX9P55771 341 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 ODF3L1Q8IXM7 274 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 GCSAMQ8N6F7 178 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 MEGF10Q96KG7 1140 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 DCTN5Q9BTE1 182 aa11.4□□□□□ -0.58
NEK3-205ENST00000610828 NKX6-2Q9C056 277 aaPredicted RBP11.4□□□□□ -0.58
NEK3-205ENST00000610828 ZGRF1Q86YA3 2104 aa11.4□□□□□ -0.59
NEK3-205ENST00000610828 A0A0G2JNJ9 132 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 DYNLT3P51808 116 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 TDGF1P3P51864 188 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 ZNF273Q14593 569 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 OR2B11Q5JQS5 317 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 TMEM182Q6ZP80 229 aaPredicted RBP11.39□□□□□ -0.59
NEK3-205ENST00000610828 OR10Z1Q8NGY1 313 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 LURAP1Q96LR2 239 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 Q9UFV3 132 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 ICE1Q9Y2F5 2266 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 CEP295Q9C0D2 2601 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 IGLV3-9A0A075B6K5 115 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 DEFB108AA8MXU0 73 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 RAMP3O60896 148 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 ZNF737O75373 536 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 TSPAN15O95858 294 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 BAXQ07812 192 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 GUCA2BQ16661 112 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 LTC4SQ16873 150 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 MIDNQ504T8 468 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 SVBPQ8N300 66 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 Q8NA96 180 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 ITLN1Q8WWA0 313 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 COL25A1Q9BXS0 654 aaPredicted RBP11.39□□□□□ -0.59
NEK3-205ENST00000610828 MRPL37Q9BZE1 423 aaKnown RBP11.39□□□□□ -0.59
NEK3-205ENST00000610828 CACFD1Q9UGQ2 172 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 DIDO1Q9BTC0 2240 aaKnown RBP11.39□□□□□ -0.59
NEK3-205ENST00000610828 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
NEK3-205ENST00000610828 MED19A0JLT2 244 aaPredicted RBP11.38□□□□□ -0.59
NEK3-205ENST00000610828 KIAA1324LA8MWY0 1029 aaPredicted RBP11.38□□□□□ -0.59
NEK3-205ENST00000610828 SPINT2O43291 252 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms