RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ZNF660Q6AZW8 331 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 MINDY2Q8NBR6 621 aa13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 SETD9Q8NE22 299 aa13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 C8orf4Q9NR00 106 aa13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 GAR1Q9NY12 217 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-227ENST00000602011 EPPK1P58107 5090 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 OVOL1O14753 267 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 PDCD6O75340 191 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 UBBP0CG47 229 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 SLC2A2P11168 524 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 MAPK3P27361 379 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 SMN1Q16637 294 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 PYHIN1Q6K0P9 492 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 FAM53AQ6NSI3 398 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 ZNF833PQ6ZTB9 187 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 Q96M66 194 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 RNF5Q99942 180 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 NABP2Q9BQ15 211 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 KLK15Q9H2R5 256 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 PIPOXQ9P0Z9 390 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 ABRACLQ9P1F3 81 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 STEAP1Q9UHE8 339 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 RNF150Q9ULK6 438 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 WSB1Q9Y6I7 421 aa13.85□□□□□ -0.19
SHKBP1-227ENST00000602011 TRAV8-7A0A075B6U6 113 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 CRTAPO75718 401 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 NDUFA3O95167 84 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 LY86O95711 162 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 MYF6P23409 242 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 CD40LGP29965 261 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 MC5RP33032 325 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 CRIP2P52943 208 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 LYPD6Q86Y78 171 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 ZNF485Q8NCK3 441 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 OR2AK2Q8NG84 335 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 PGLYRP3Q96LB9 341 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 ANKRD60Q9BZ19 345 aa13.84□□□□□ -0.19
SHKBP1-227ENST00000602011 G3V318 75 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 RAB29O14966 203 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 ATP6V0E1O15342 81 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 RBBP9O75884 186 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 LALBAP00709 142 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 MAS1P04201 325 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 ADARB1P78563 741 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 ODF3L1Q8IXM7 274 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 OR6Q1Q8NGQ2 317 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 OR13C5Q8NGS8 318 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 ORAI1Q96D31 301 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 NEDD4LQ96PU5 975 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 OR14A2Q96R54 314 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 BANF2Q9H503 90 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 GNB4Q9HAV0 340 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 PARP11Q9NR21 331 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 CLEC2DQ9UHP7 191 aa13.83□□□□□ -0.2
SHKBP1-227ENST00000602011 UBE2QL1A1L167 161 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 EFCAB10A6NFE3 127 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 LINC01619G3V211 115 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 ITGB1BP1O14713 200 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 CD200R1LQ6Q8B3 271 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 OR52L2PQ8NGH6 319 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 MUC7Q8TAX7 377 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 MRPL30Q8TCC3 161 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 DCUN1D4Q92564 292 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 FLYWCH2Q96CP2 140 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 DERL3Q96Q80 235 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 RIMS4Q9H426 269 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 ZMAT4Q9H898 229 aa13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 CNOT2Q9NZN8 540 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 FOXA2Q9Y261 457 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-227ENST00000602011 MAGEA13PA6NCF6 341 aa13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 ERICH4A6NGS2 130 aa13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 OR5H14A6NHG9 310 aa13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 PPP1CCP36873 323 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 ST3GAL4Q11206 333 aa13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 SIGIRRQ6IA17 410 aa13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 MS4A15Q8N5U1 240 aa13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 MRPL20Q9BYC9 149 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 TOLLIPQ9H0E2 274 aa13.81□□□□□ -0.2
SHKBP1-227ENST00000602011 A0A1W2PPK0 400 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 SAP30O75446 220 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 OR8U9P0C7N5 309 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 BLVRBP30043 206 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 GNB1P62873 340 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 HMGN3Q15651 99 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 AKIRIN2Q53H80 203 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 C6orf141Q5SZD1 244 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 ASPHD1Q5U4P2 390 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 PACRGLQ8N7B6 248 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 GGHQ92820 318 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 RBMXL1Q96E39 390 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 SLA2Q9H6Q3 261 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 ISYNA1Q9NPH2 558 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 MGAT4AQ9UM21 535 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 NUBP2Q9Y5Y2 271 aa13.8□□□□□ -0.2
SHKBP1-227ENST00000602011 SAA2-SAA4A0A096LPE2 208 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 RRHO14718 337 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 BAG2O95816 211 aa13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 HSPB1P04792 205 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-227ENST00000602011 GSTP1P09211 210 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms