RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CT45A3Q8NHU0 189 aa6.62□□□□□ -1.35
SMAD4-215ENST00000592911 CANT1Q8WVQ1 401 aa6.62□□□□□ -1.35
SMAD4-215ENST00000592911 TRUB1Q8WWH5 349 aaKnown RBP6.62□□□□□ -1.35
SMAD4-215ENST00000592911 ALX4Q9H161 411 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-215ENST00000592911 RIBC2Q9H4K1 309 aa6.62□□□□□ -1.35
SMAD4-215ENST00000592911 RCC2Q9P258 522 aaKnown RBP6.62□□□□□ -1.35
SMAD4-215ENST00000592911 PEMTQ9UBM1 199 aa6.62□□□□□ -1.35
SMAD4-215ENST00000592911 JPT1Q9UK76 154 aa6.62□□□□□ -1.35
SMAD4-215ENST00000592911 ST3GAL6Q9Y274 331 aa6.62□□□□□ -1.35
SMAD4-215ENST00000592911 KLK5Q9Y337 293 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-215ENST00000592911 FAM90A7PA6NKC0 464 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 SNTNA6NMZ2 147 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 OR4C45A6NMZ5 311 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 FAM90A23PA8MXZ1 464 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 AIPO00170 330 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 RRHO14718 337 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 YPEL1O60688 119 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 LY6G6CO95867 125 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 RAB3AP20336 220 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 MC5RP33032 325 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 MECP2P51608 486 aaKnown RBP6.61□□□□□ -1.35
SMAD4-215ENST00000592911 TPPP2P59282 170 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 CX3CL1P78423 397 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 HTD2P86397 168 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 ZNF85Q03923 595 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 ALKBH1Q13686 389 aaKnown RBP6.61□□□□□ -1.35
SMAD4-215ENST00000592911 ECSCRQ19T08 205 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 ZNF833PQ6ZTB9 187 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 WFDC3Q8IUB2 231 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 SYS1Q8N2H4 156 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 OR51A2Q8NGJ7 313 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 OR52N1Q8NH53 320 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 GATAD1Q8WUU5 269 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 TNFAIP8L1Q8WVP5 186 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 RGP1Q92546 391 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-215ENST00000592911 YPEL2Q96QA6 119 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 NR1H4Q96RI1 486 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-215ENST00000592911 TBX5Q99593 518 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 NABP2Q9BQ15 211 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 SULT4A1Q9BR01 284 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 ABHD14AQ9BUJ0 271 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 ST6GALNAC5Q9BVH7 336 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 TMED9Q9BVK6 235 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 METTL9Q9H1A3 318 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 MBNL3Q9NUK0 354 aaKnown RBP6.61□□□□□ -1.35
SMAD4-215ENST00000592911 CNOT2Q9NZN8 540 aaKnown RBP6.61□□□□□ -1.35
SMAD4-215ENST00000592911 PIPOXQ9P0Z9 390 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 ARL2BPQ9Y2Y0 163 aa6.61□□□□□ -1.35
SMAD4-215ENST00000592911 C13orf42A0A1B0GVH6 325 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 B2RBV5 119 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 GABRPO00591 440 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 ITGB1BP1O14713 200 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 SLC22A1O15245 554 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 SC5DO75845 299 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 CD2P06729 351 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 GTF2F2P13984 249 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 PRKACGP22612 351 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 CAPGP40121 348 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 MAP2K4P45985 399 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 DAPP51397 102 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 ZNF134P52741 427 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 NANOS3P60323 173 aaKnown RBP6.6□□□□□ -1.35
SMAD4-215ENST00000592911 PIGYQ3MUY2 71 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 MORN2Q502X0 79 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 TP53I3Q53FA7 332 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 SLC25A30Q5SVS4 291 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 KDM4DQ6B0I6 523 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 LGALS9CQ6DKI2 356 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 FAM53AQ6NSI3 398 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-215ENST00000592911 IL34Q6ZMJ4 242 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 PPP1R27Q86WC6 154 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 HS3ST5Q8IZT8 346 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 GHSRQ92847 366 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 USMG5Q96IX5 58 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 GPER1Q99527 375 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 S100A13Q99584 98 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 TRAPPC2LQ9UL33 140 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 TP53TG1Q9Y2A0 90 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
SMAD4-215ENST00000592911 DNAH6Q9C0G6 4158 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 MCRIP1C9JLW8 97 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 J3QRE1 110 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 SLC31A2O15432 143 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 FKBP6O75344 327 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 HBZP02008 142 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 TRGV3P03979 118 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 CSN3P07498 182 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 EGR2P11161 476 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-215ENST00000592911 CALB2P22676 271 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 TCTAP57738 103 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 NDPQ00604 133 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 TNFRSF9Q07011 255 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 RIPK1Q13546 671 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 LRRC36Q1X8D7 754 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 SYT6Q5T7P8 510 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-215ENST00000592911 MEDAGQ5VYS4 303 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 CEMP1Q6PRD7 247 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-215ENST00000592911 UNQ5815/PRO19632Q6UWF5 114 aa6.59□□□□□ -1.35
SMAD4-215ENST00000592911 BCDIN3DQ7Z5W3 292 aaKnown RBP6.59□□□□□ -1.35
SMAD4-215ENST00000592911 ACBD7Q8N6N7 88 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms