RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 LHFPL4Q7Z7J7 247 aa11.73□□□□□ -0.53
COMMD4-225ENST00000569245 TOMM5Q8N4H5 51 aa11.73□□□□□ -0.53
COMMD4-225ENST00000569245 TMEM229BQ8NBD8 167 aa11.73□□□□□ -0.53
COMMD4-225ENST00000569245 COQ2Q96H96 371 aa11.73□□□□□ -0.53
COMMD4-225ENST00000569245 AJUBAQ96IF1 538 aa11.73□□□□□ -0.53
COMMD4-225ENST00000569245 MEGF9Q9H1U4 602 aa11.73□□□□□ -0.53
COMMD4-225ENST00000569245 IFT46Q9NQC8 304 aa11.73□□□□□ -0.53
COMMD4-225ENST00000569245 RNF114Q9Y508 228 aa11.73□□□□□ -0.53
COMMD4-225ENST00000569245 TMEM30CPA0ZSE6 113 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 ODAMA1E959 279 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 TAS2R19P59542 299 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 AP3S2P59780 193 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 DYRK1AQ13627 763 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 SSX2Q16385 188 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 PRAMEF5Q5TYX0 476 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 ZNF57Q68EA5 555 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-225ENST00000569245 Q6ZPA2 131 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 MOB1BQ7L9L4 216 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 GVQW1Q8N7I0 195 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 SETD6Q8TBK2 473 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 MALSU1Q96EH3 234 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 CLEC7AQ9BXN2 247 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 TMEM133Q9H2Q1 129 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-225ENST00000569245 Q9N2K0 584 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 TBL2Q9Y4P3 447 aaKnown RBP11.72□□□□□ -0.53
COMMD4-225ENST00000569245 DSCAML1Q8TD84 2053 aa11.72□□□□□ -0.53
COMMD4-225ENST00000569245 IGHV2-26A0A0B4J1V2 119 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 ODF3BA8MYP8 253 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 PLA2G10O15496 165 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 CD74P04233 296 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 ASAH1Q13510 395 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 AANATQ16613 207 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 ZNF626Q68DY1 528 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 OR52W1Q6IF63 320 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 Q6ZSV7 163 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 BEST4Q8NFU0 473 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 LINC01006Q8NI28 216 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 WFDC12Q8WWY7 111 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 CORO2AQ92828 525 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 SNAPC3Q92966 411 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 C7orf50Q9BRJ6 194 aaKnown RBP11.71□□□□□ -0.53
COMMD4-225ENST00000569245 ST6GALNAC5Q9BVH7 336 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 MBNL3Q9NUK0 354 aaKnown RBP11.71□□□□□ -0.53
COMMD4-225ENST00000569245 TAS2R3Q9NYW6 316 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 OR6C3Q9NZP0 311 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 ZNF230Q9UIE0 474 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-225ENST00000569245 TBC1D24Q9ULP9 559 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 MGAT4AQ9UM21 535 aa11.71□□□□□ -0.53
COMMD4-225ENST00000569245 MEIKINA0A087WXM9 373 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 ZNF736B4DX44 427 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-225ENST00000569245 MMP23AO75900 390 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 TBPP20226 339 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 RAB13P51153 203 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 DEFA1P59665 94 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 DEFA3P59666 94 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 SRSF4Q08170 494 aaKnown RBP11.7□□□□□ -0.54
COMMD4-225ENST00000569245 ACTBL2Q562R1 376 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 DYNAPQ8N1N2 210 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 ABHD12Q8N2K0 398 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 ZNF565Q8N9K5 539 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 OR4K15Q8NH41 348 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 ZNF286AQ9HBT8 521 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 RAB18Q9NP72 206 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 KIF25Q9UIL4 384 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 ANXA10Q9UJ72 324 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
COMMD4-225ENST00000569245 IGKV1D-8A0A087WSZ0 117 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 FAM172BPA6NC97 362 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 NAP1L6A6NFF2 107 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 TOR1AO14656 332 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 AKAIN1P0CW23 69 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 NFYBP25208 207 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 HLA-DMAP28067 261 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 HTR1DP28221 377 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 GLP1RP43220 463 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 TAS2R46P59540 309 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 MINOS1Q5TGZ0 78 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 STEAP1BQ6NZ63 245 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 ZNF554Q86TJ5 538 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 OR5AP2Q8NGF4 316 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 MAFIPQ8WZ33 124 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 C16orf95Q9H693 158 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 HRASLSQ9HDD0 168 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 TRAPPC2LQ9UL33 140 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 MINOS1-NBL1R4GNA1 71 aa11.69□□□□□ -0.54
COMMD4-225ENST00000569245 KIAA2026Q5HYC2 2103 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 KBTBD11-OT1A0A1B0GTJ5 212 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 ZNF729A6NN14 1252 aaPredicted RBP11.68□□□□□ -0.54
COMMD4-225ENST00000569245 CENPXA8MT69 81 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 VGLL3A8MV65 326 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 TRDCB7Z8K6 153 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 F2RL2O00254 374 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 LYRM1O43325 122 aa11.68□□□□□ -0.54
COMMD4-225ENST00000569245 TSPAN9O75954 239 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms