RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ZFP1Q6P2D0 407 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 DLX4Q92988 240 aaPredicted RBP12.02□□□□□ -0.49
NME3-211ENST00000568561 FAM46BQ96A09 425 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 NABP2Q9BQ15 211 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 RAB9BQ9NP90 201 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 BABAM2Q9NXR7 383 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 A3GALT2U3KPV4 340 aa12.02□□□□□ -0.49
NME3-211ENST00000568561 CSMD3Q7Z407 3707 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 FAM90A10PA6NDY2 464 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 SOX15O60248 233 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 SC5DO75845 299 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
NME3-211ENST00000568561 FSTP19883 344 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 DCKP27707 260 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 INSL3P51460 131 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 GPR176Q14439 515 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 C5orf64Q2M2E5 130 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 DMKNQ6E0U4 476 aaPredicted RBP12.01□□□□□ -0.49
NME3-211ENST00000568561 TRAT1Q6PIZ9 186 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 HAPLN4Q86UW8 402 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 C10orf67Q8IYJ2 551 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 MRPL30Q8TCC3 161 aaKnown RBP12.01□□□□□ -0.49
NME3-211ENST00000568561 ARPC1AQ92747 370 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 PGLYRP3Q96LB9 341 aa12.01□□□□□ -0.49
NME3-211ENST00000568561 LYSTQ99698 3801 aa12□□□□□ -0.49
NME3-211ENST00000568561 BIRC6Q9NR09 4857 aa12□□□□□ -0.49
NME3-211ENST00000568561 IGHV4OR15-8A0A075B7B6 117 aa12□□□□□ -0.49
NME3-211ENST00000568561 A0A087WW49 117 aa12□□□□□ -0.49
NME3-211ENST00000568561 TRBV5-7A0A0A0MS05 114 aa12□□□□□ -0.49
NME3-211ENST00000568561 A0A1W2PN81 502 aa12□□□□□ -0.49
NME3-211ENST00000568561 TRIM64CA6NLI5 447 aa12□□□□□ -0.49
NME3-211ENST00000568561 GPX5O75715 221 aa12□□□□□ -0.49
NME3-211ENST00000568561 MYL12AP19105 171 aa12□□□□□ -0.49
NME3-211ENST00000568561 CHRNA7P36544 502 aa12□□□□□ -0.49
NME3-211ENST00000568561 STEAP3Q658P3 488 aa12□□□□□ -0.49
NME3-211ENST00000568561 FAM131AQ6UXB0 335 aa12□□□□□ -0.49
NME3-211ENST00000568561 ZNF429Q86V71 674 aa12□□□□□ -0.49
NME3-211ENST00000568561 MINDY2Q8NBR6 621 aa12□□□□□ -0.49
NME3-211ENST00000568561 Q96M66 194 aa12□□□□□ -0.49
NME3-211ENST00000568561 RDH12Q96NR8 316 aa12□□□□□ -0.49
NME3-211ENST00000568561 CHCHD6Q9BRQ6 235 aa12□□□□□ -0.49
NME3-211ENST00000568561 MBNL3Q9NUK0 354 aaKnown RBP12□□□□□ -0.49
NME3-211ENST00000568561 KCNIP1Q9NZI2 227 aa12□□□□□ -0.49
NME3-211ENST00000568561 JPT1Q9UK76 154 aa12□□□□□ -0.49
NME3-211ENST00000568561 DIMT1Q9UNQ2 313 aaKnown RBP12□□□□□ -0.49
NME3-211ENST00000568561 ST8SIA5O15466 376 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 BAG2O95816 211 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 IGHV3-11P01762 117 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 GP9P14770 177 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 FUT3P21217 361 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 DOC2BQ14184 412 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 SRSF7Q16629 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
NME3-211ENST00000568561 LRRC36Q1X8D7 754 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 YIF1BQ5BJH7 314 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 LIN54Q6MZP7 749 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 GLDNQ6ZMI3 551 aaPredicted RBP11.99□□□□□ -0.49
NME3-211ENST00000568561 ZNF833PQ6ZTB9 187 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 ABHD5Q8WTS1 349 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 MRPS24Q96EL2 167 aaKnown RBP11.99□□□□□ -0.49
NME3-211ENST00000568561 TOLLIPQ9H0E2 274 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 IFI27L2Q9H2X8 130 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 FBXL15Q9H469 300 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 KIAA1456Q9P272 454 aa11.99□□□□□ -0.49
NME3-211ENST00000568561 EXOSC1Q9Y3B2 195 aaKnown RBP11.99□□□□□ -0.49
NME3-211ENST00000568561 FAM90A7PA6NKC0 464 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 FAM90A23PA8MXZ1 464 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 LINC01619G3V211 115 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 PDCD6O75340 191 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 CA11O75493 328 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 LGALS1P09382 135 aaKnown RBP11.98□□□□□ -0.49
NME3-211ENST00000568561 SNRPBP14678 240 aaKnown RBP11.98□□□□□ -0.49
NME3-211ENST00000568561 C19orf54Q5BKX5 351 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 ZFAND6Q6FIF0 208 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 LYPD6Q86Y78 171 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 PQLC1Q8N2U9 271 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 ZNF555Q8NEP9 628 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 NPBQ8NG41 125 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 OR2AK2Q8NG84 335 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 DERL3Q96Q80 235 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 SULT4A1Q9BR01 284 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 FAM103A1Q9BTL3 118 aaKnown RBP11.98□□□□□ -0.49
NME3-211ENST00000568561 S100A14Q9HCY8 104 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 GAB2Q9UQC2 676 aa11.98□□□□□ -0.49
NME3-211ENST00000568561 FCN1O00602 326 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 NDUFA3O95167 84 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 LYL1P12980 280 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 CAPGP40121 348 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 CX3CL1P78423 397 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 RPL39P5Q59GN2 51 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 C6orf141Q5SZD1 244 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 OR10K2Q6IF99 312 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 ZNF485Q8NCK3 441 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 IL1F10Q8WWZ1 152 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 TMEM80Q96HE8 168 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 PARP12Q9H0J9 701 aaKnown RBP11.97□□□□□ -0.49
NME3-211ENST00000568561 KCNK15Q9H427 330 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 PALMDQ9NP74 551 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 TPSG1Q9NRR2 321 aa11.97□□□□□ -0.49
NME3-211ENST00000568561 SMPD3Q9NY59 655 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms