RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ARL11Q969Q4 196 aa15.17■□□□□ 0.02
SMPD3-211ENST00000568373 GPR146Q96CH1 333 aa15.17■□□□□ 0.02
SMPD3-211ENST00000568373 LYRM2Q9NU23 88 aaPredicted RBP15.17■□□□□ 0.02
SMPD3-211ENST00000568373 PCNX1Q96RV3 2341 aa15.17■□□□□ 0.02
SMPD3-211ENST00000568373 RNF212BA8MTL3 300 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 MMP9P14780 707 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 SSTR5P35346 364 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 GATA4P43694 442 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 CAV2P51636 162 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 MST1LQ2TV78 715 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 STPG2Q8N412 459 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 ZBTB34Q8NCN2 500 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 NUP37Q8NFH4 326 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 JKAMPQ9P055 326 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 FAM24AA6NFZ4 105 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 LHBP01229 141 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 FAM87AP0C7U9 286 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 ZNF16P17020 682 aaPredicted RBP15.16■□□□□ 0.02
SMPD3-211ENST00000568373 EPHA1P21709 976 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 VAMP2P63027 116 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 ZNF585BQ52M93 769 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 TRAT1Q6PIZ9 186 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 RNASE11Q8TAA1 199 aaKnown RBP15.16■□□□□ 0.02
SMPD3-211ENST00000568373 OR2D2Q9H210 308 aa15.16■□□□□ 0.02
SMPD3-211ENST00000568373 IGSF23A1L1A6 192 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 NUDT19A8MXV4 375 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 MED6O75586 246 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 TMPRSS3P57727 454 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 EDDM3AQ14507 147 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 FAM53AQ6NSI3 398 aaPredicted RBP15.15■□□□□ 0.02
SMPD3-211ENST00000568373 BPIFCQ8NFQ6 507 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 SNX22Q96L94 193 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 GINS3Q9BRX5 216 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 SLC25A31Q9H0C2 315 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 MMP26Q9NRE1 261 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 PLA2G2EQ9NZK7 142 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 RNF115Q9Y4L5 304 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 NBEAQ8NFP9 2946 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 IGHV3OR15-7A0A075B7D8 119 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 PTAFRP25105 342 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 PPP1CCP36873 323 aaKnown RBP15.15■□□□□ 0.02
SMPD3-211ENST00000568373 PXDC1Q5TGL8 231 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 PPP1R35Q8TAP8 253 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 RNF150Q9ULK6 438 aa15.15■□□□□ 0.02
SMPD3-211ENST00000568373 C15orf65H3BRN8 121 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 WRBO00258 174 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 MGST3O14880 152 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 SPINT2O43291 252 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 CHST1O43916 411 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 NXPH3O95157 252 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 TMEM50AO95807 157 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 IGKV1-5P01602 117 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 IGHV1-46P01743 117 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 LPAR6P43657 344 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 AKR1C2P52895 323 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 MSMO1Q15800 293 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 WFDC8Q8IUA0 241 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 TMEM252Q8N6L7 170 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 IL19Q9UHD0 177 aa15.14■□□□□ 0.01
SMPD3-211ENST00000568373 ODAMA1E959 279 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 SEC11BP0C7V7 166 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 HTD2P86397 168 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 TNFAIP6P98066 277 aaPredicted RBP15.13■□□□□ 0.01
SMPD3-211ENST00000568373 EIF4EBP1Q13541 118 aaPredicted RBP15.13■□□□□ 0.01
SMPD3-211ENST00000568373 IZUMO4Q1ZYL8 232 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 IL34Q6ZMJ4 242 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 Q6ZRM9 215 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 C5orf30Q96GV9 206 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 DCTN5Q9BTE1 182 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 ESRP2Q9H6T0 727 aaKnown RBP15.13■□□□□ 0.01
SMPD3-211ENST00000568373 FAM212BQ9NTI7 297 aaPredicted RBP15.13■□□□□ 0.01
SMPD3-211ENST00000568373 USF3Q68DE3 2245 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 MED19A0JLT2 244 aaPredicted RBP15.13■□□□□ 0.01
SMPD3-211ENST00000568373 KIAA1324LA8MWY0 1029 aaPredicted RBP15.13■□□□□ 0.01
SMPD3-211ENST00000568373 SPP1P10451 314 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 BLOC1S1P78537 153 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 RBPJQ06330 500 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 RFESDQ8TAC1 157 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 HRH4Q9H3N8 390 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 GCM1Q9NP62 436 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 CACNG5Q9UF02 275 aa15.13■□□□□ 0.01
SMPD3-211ENST00000568373 K7N7A8 449 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 ABCD4O14678 606 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 THBDP07204 575 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 ADH4P08319 380 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 C1QTNF9P0C862 333 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 M6PRP20645 277 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 GZMHP20718 246 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 SSX8Q7RTT4 187 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 ZNF808Q8N4W9 903 aaPredicted RBP15.12■□□□□ 0.01
SMPD3-211ENST00000568373 NARS2Q96I59 477 aaKnown RBP15.12■□□□□ 0.01
SMPD3-211ENST00000568373 PARP11Q9NR21 331 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 RNF7Q9UBF6 113 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 IGHV3-43A0A0B4J1X8 118 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 MEX3AA1L020 520 aaKnown RBP15.12■□□□□ 0.01
SMPD3-211ENST00000568373 DPRXA6NFQ7 191 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 IGHV3-43DP0DP04 118 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 TNFSF4P23510 183 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 OMGP23515 440 aa15.12■□□□□ 0.01
SMPD3-211ENST00000568373 ASCL1P50553 236 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms