RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 EMG1Q92979 244 aaKnown RBP3.43□□□□□ -1.86
LINC00561-201ENST00000565815 MALSU1Q96EH3 234 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SLC6A7Q99884 636 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 NRIP2Q9BQI9 281 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 C1QTNF6Q9BXI9 259 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SH3BGRL2Q9UJC5 107 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 OR52A1Q9UKL2 312 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 CSAG2Q9Y5P2 127 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 CPAMD8Q8IZJ3 1885 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 LOC107986453A0A1B0GWG9 222 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 TMEM14DPA8MWL7 114 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 NME2P1O60361 137 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 NPIPB7O75200 414 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 AHSA1O95433 338 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 MT-ND4LP03901 98 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 CD5P06127 495 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 PTNP21246 168 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 FKBP2P26885 142 aaKnown RBP3.43□□□□□ -1.86
LINC00561-201ENST00000565815 OR3A2P47893 321 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 ATP1B3P54709 279 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 UCP2P55851 309 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SLC26A5P58743 744 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 FAM3AP98173 230 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 EIF2B1Q14232 305 aaKnown RBP3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SMCO1Q147U7 214 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 LRRC37A5PQ49AS3 106 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SCGB2B2Q4G0G5 96 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 C1orf189Q5VU69 101 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 DHRS11Q6UWP2 260 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 C16orf47Q6ZP98 133 aaPredicted RBP3.43□□□□□ -1.86
LINC00561-201ENST00000565815 HIST2H3AQ71DI3 136 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 COX15Q7KZN9 410 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 OR56B1Q8NGI3 324 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 OR5D14Q8NGL3 314 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 OR10R2Q8NGX6 335 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 OR8S1Q8NH09 359 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 LYPD6BQ8NI32 183 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 SFT2D1Q8WV19 159 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 ST8SIA1Q92185 356 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 DCUN1D4Q92564 292 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 C10orf35Q96D05 121 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 IMMP1LQ96LU5 166 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 RASL10BQ96S79 203 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 CHST6Q9GZX3 395 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 TAS2R4Q9NYW5 299 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 METTL1Q9UBP6 276 aaKnown RBP3.43□□□□□ -1.86
LINC00561-201ENST00000565815 STRAPQ9Y3F4 350 aaKnown RBP3.43□□□□□ -1.86
LINC00561-201ENST00000565815 RHBDD3Q9Y3P4 386 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 HCFC1P51610 2035 aa3.43□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF732B4DXR9 585 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 GATCO43716 136 aaKnown RBP3.42□□□□□ -1.86
LINC00561-201ENST00000565815 FADS1O60427 444 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 S100PP25815 95 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 GRPRP30550 384 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 MAS1LP35410 378 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 ALDH3B1P43353 468 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 PPP1CAP62136 330 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 QRFPP83859 136 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 OC90Q02509 493 aaPredicted RBP3.42□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF117Q03924 483 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 ECH1Q13011 328 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 PDZK1IP1Q13113 114 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 RHEBQ15382 184 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 OR1C1Q15619 314 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 ACER2Q5QJU3 275 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 ZGRF1Q86YA3 2104 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.42□□□□□ -1.86
LINC00561-201ENST00000565815 JAGN1Q8N5M9 183 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 OR5T3Q8NGG3 340 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 MFSD8Q8NHS3 518 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 RNF133Q8WVZ7 376 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 CPNE2Q96FN4 548 aaPredicted RBP3.42□□□□□ -1.86
LINC00561-201ENST00000565815 CST11Q9H112 138 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 WDR13Q9H1Z4 485 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 RHOFQ9HBH0 211 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 TREM1Q9NP99 234 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 CYTL1Q9NRR1 136 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 C1orf123Q9NWV4 160 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 SLC22A13Q9Y226 551 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 NOSIPQ9Y314 301 aaKnown RBP3.42□□□□□ -1.86
LINC00561-201ENST00000565815 TIMM10BQ9Y5J6 103 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 FLVCR1Q9Y5Y0 555 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 FBN3Q75N90 2809 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 PRRC2AP48634 2157 aaKnown RBP3.42□□□□□ -1.86
LINC00561-201ENST00000565815 NBASA2RRP1 2371 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 BORCS7-ASMTA0A0B4J1R7 106 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 A0A1W2PNV4 684 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 BTBD17A6NE02 478 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 SERPINE3A8MV23 424 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 ZNF705EA8MWA4 302 aaPredicted RBP3.42□□□□□ -1.86
LINC00561-201ENST00000565815 RNASEK-C17orf49H0YIS7 233 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 WRBO00258 174 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 GPR31O00270 319 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 DCTN6O00399 190 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 PLPP3O14495 311 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 TGOLN2O43493 480 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 HCRTR1O43613 425 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 SLC16A7O60669 478 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 ALOX12BO75342 701 aa3.42□□□□□ -1.86
LINC00561-201ENST00000565815 CLPSP04118 112 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms