RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 URM1Q9BTM9 101 aaKnown RBP12.14□□□□□ -0.47
SNX6-205ENST00000555648 FAAP24Q9BTP7 215 aa12.14□□□□□ -0.47
SNX6-205ENST00000555648 PLGRKTQ9HBL7 147 aa12.14□□□□□ -0.47
SNX6-205ENST00000555648 PLSCR3Q9NRY6 295 aa12.14□□□□□ -0.47
SNX6-205ENST00000555648 KIAA1456Q9P272 454 aa12.14□□□□□ -0.47
SNX6-205ENST00000555648 K7EIL1 84 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 BPNT1O95861 308 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 CHATP28329 748 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 BLVRBP30043 206 aaPredicted RBP12.13□□□□□ -0.47
SNX6-205ENST00000555648 RANBP1P43487 201 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 DCTN2Q13561 401 aaKnown RBP12.13□□□□□ -0.47
SNX6-205ENST00000555648 C1orf100Q5SVJ3 147 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 LIPKQ5VXJ0 399 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 TMEM65Q6PI78 240 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 LRRTM1Q86UE6 522 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 FAM71E2Q8N5Q1 922 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 OR6M1Q8NGM8 313 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 TMEM203Q969S6 136 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 HSPB9Q9BQS6 159 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 MRPL20Q9BYC9 149 aaKnown RBP12.13□□□□□ -0.47
SNX6-205ENST00000555648 CCDC90BQ9GZT6 254 aa12.13□□□□□ -0.47
SNX6-205ENST00000555648 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
SNX6-205ENST00000555648 ARL6IP5O75915 188 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
SNX6-205ENST00000555648 KRTAP10-11P60412 298 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 ACTBP60709 375 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 TRAM1Q15629 374 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 LCNL1Q6ZST4 164 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 MOB1BQ7L9L4 216 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 OR5M8Q8NGP6 311 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 KCTD7Q96MP8 289 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 DUX3Q96PT4 197 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 P2RX4Q99571 388 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 CHCHD6Q9BRQ6 235 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 PIPOXQ9P0Z9 390 aa12.12□□□□□ -0.47
SNX6-205ENST00000555648 WI2-2373I1.2A0A1W2PRP0 233 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 SLC22A1O15245 554 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 RGS10O43665 173 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 UCHL1P09936 223 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 ARSBP15848 533 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 PSMA1P25786 263 aaKnown RBP12.11□□□□□ -0.47
SNX6-205ENST00000555648 EGFEM1PQ0D2K5 195 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 KIR2DS1Q14954 304 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 PLGLAQ15195 96 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 HMGN3Q15651 99 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 LY6G6FQ5SQ64 297 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 NABP2Q9BQ15 211 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 MGAT4AQ9UM21 535 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 LSM2Q9Y333 95 aaKnown RBP12.11□□□□□ -0.47
SNX6-205ENST00000555648 CMYA5Q8N3K9 4069 aa12.11□□□□□ -0.47
SNX6-205ENST00000555648 SAA2-SAA4A0A096LPE2 208 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 RAB29O14966 203 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 NBR2O15453 112 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 HSPA12AO43301 675 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 IGHG4P01861 327 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 IGF1P05019 195 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 SAA2P0DJI9 122 aaPredicted RBP12.1□□□□□ -0.47
SNX6-205ENST00000555648 OR3A3P47888 321 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 AQP4P55087 323 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 DGCR2P98153 550 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 CD69Q07108 199 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 P2RY14Q15391 338 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 RAB11BQ15907 218 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 DEFB136Q30KP8 78 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 LIN54Q6MZP7 749 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 ZNF833PQ6ZTB9 187 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 SVOPQ8N4V2 548 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 C4orf3Q8WVX3 66 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 NICN1Q9BSH3 213 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 KCNK15Q9H427 330 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
SNX6-205ENST00000555648 TMEM14DPA8MWL7 114 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 ST8SIA5O15466 376 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 RAMP3O60896 148 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 GSTP1P09211 210 aaKnown RBP12.09□□□□□ -0.47
SNX6-205ENST00000555648 MRPS15P82914 257 aaKnown RBP12.09□□□□□ -0.47
SNX6-205ENST00000555648 UNC119Q13432 240 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 FAM71F2Q6NXP2 309 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 C5orf24Q7Z6I8 188 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 ODF3L1Q8IXM7 274 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 RNF152Q8N8N0 203 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 RBMXL1Q96E39 390 aaKnown RBP12.09□□□□□ -0.47
SNX6-205ENST00000555648 ANKRD60Q9BZ19 345 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 OR51J1Q9H342 316 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 NKX1-2Q9UD57 310 aaPredicted RBP12.09□□□□□ -0.47
SNX6-205ENST00000555648 SLC23A1Q9UHI7 598 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
SNX6-205ENST00000555648 AK6Q9Y3D8 172 aaKnown RBP12.09□□□□□ -0.47
SNX6-205ENST00000555648 H7C2Y5 167 aa12.08□□□□□ -0.48
SNX6-205ENST00000555648 SLC17A2O00624 439 aa12.08□□□□□ -0.48
SNX6-205ENST00000555648 NAPSAO96009 420 aa12.08□□□□□ -0.48
SNX6-205ENST00000555648 HLA-DRB1P01911 266 aa12.08□□□□□ -0.48
SNX6-205ENST00000555648 ZBTB25P24278 435 aa12.08□□□□□ -0.48
SNX6-205ENST00000555648 PSMD7P51665 324 aa12.08□□□□□ -0.48
SNX6-205ENST00000555648 RPS25P62851 125 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms