RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 A0A1W2PRV1 198 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 FAM25AB3EWG3 89 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 FAM25CB3EWG5 89 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 FAM25GB3EWG6 89 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 FAM157AC9JC47 383 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 M0R1W7 72 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 SULT1C2O00338 296 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 HSPB6O14558 160 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 PHF1O43189 567 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-213ENST00000550629 KCNAB3O43448 404 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 ORC5O43913 435 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 FCN3O75636 299 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 TFF1P04155 84 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 CD3GP09693 182 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DUX4L2P0CJ85 424 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DUX4L3P0CJ86 424 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DUX4L4P0CJ87 422 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DUX4L5P0CJ88 424 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DUX4L6P0CJ89 424 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DUX4L7P0CJ90 424 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 IGHV4-31P0DP07 118 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 SELLP14151 372 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 IL2RGP31785 369 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 TNFSF8P32971 234 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 ETV6P41212 452 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 CBX5P45973 191 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DVL1P1P54792 670 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-213ENST00000550629 EDDM3BP56851 147 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 TAS2R20P59543 309 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 SEC61A1P61619 476 aaKnown RBP4.7□□□□□ -1.66
SCAF11-213ENST00000550629 AESQ08117 197 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 EDDM3AQ14507 147 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 ATXN7L3Q14CW9 347 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-213ENST00000550629 MOGAT2Q3SYC2 334 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 KRBOX4Q5JUW0 171 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 SPANXN2Q5MJ10 180 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 C6orf183Q5T699 404 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 RSBN1Q5VWQ0 802 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-213ENST00000550629 CYB5R2Q6BCY4 276 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 CNIH2Q6PI25 160 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DUX4L9Q6RFH8 374 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-213ENST00000550629 BTNL3Q6UXE8 466 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 CCDC190Q86UF4 302 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 BPIFB2Q8N4F0 458 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 TEX29Q8N6K0 151 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 OR4M2Q8NGB6 313 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 OR4M1Q8NGD0 313 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 OR10A7Q8NGE5 316 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 OR6Q1Q8NGQ2 317 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 COQ2Q96H96 371 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DIRAS2Q96HU8 199 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 C18orf12Q96KH6 178 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 SOSTQ9BQB4 213 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 GAL3ST2Q9H3Q3 398 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF581Q9P0T4 197 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 EXTL2Q9UBQ6 330 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 DUX4Q9UBX2 424 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 KIF25Q9UIL4 384 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 KPTNQ9Y664 436 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 CHD3Q12873 2000 aaKnown RBP4.7□□□□□ -1.66
SCAF11-213ENST00000550629 PRRC2AP48634 2157 aaKnown RBP4.7□□□□□ -1.66
SCAF11-213ENST00000550629 CELSR1Q9NYQ6 3014 aa4.7□□□□□ -1.66
SCAF11-213ENST00000550629 KBTBD11-OT1A0A1B0GTJ5 212 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 A0A1W2PQ09 198 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 TMEM235A6NFC5 223 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 FABP12A6NFH5 140 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF729A6NN14 1252 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-213ENST00000550629 PRYO14603 147 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 CTDSPLO15194 276 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 SPINT2O43291 252 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 HLA-DQB1P01920 261 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 FCGR3AP08637 254 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF728P0DKX0 622 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 CGB3P0DN86 165 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 CGB7P0DN87 165 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 GNB3P16520 340 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 TBPP20226 339 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 PRSS3P35030 304 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 KIR2DS4P43632 304 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 GLIPR1P48060 266 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 DLX6P56179 175 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 GNG2P59768 71 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ACTBP60709 375 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ACTG1P63261 375 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 LCN2P80188 198 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF45Q02386 682 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 SSBP1Q04837 148 aaKnown RBP4.69□□□□□ -1.66
SCAF11-213ENST00000550629 PMS2P11Q13670 270 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ARFRP1Q13795 201 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 KIR2DS1Q14954 304 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 TWIST1Q15672 202 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 PYHIN1Q6K0P9 492 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 ZNF880Q6PDB4 577 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 HEPN1Q6WQI6 88 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 OR52M1Q8NGK5 317 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 PLPPR1Q8TBJ4 325 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 MRPL30Q8TCC3 161 aaKnown RBP4.69□□□□□ -1.66
SCAF11-213ENST00000550629 FAM216AQ8WUB2 273 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 S100ZQ8WXG8 99 aa4.69□□□□□ -1.66
SCAF11-213ENST00000550629 H1FXQ92522 213 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms