RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CTSLP07711 333 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 MMP7P09237 267 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-217ENST00000541578 RBP1P09455 135 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 FBP1P09467 338 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 COX4I1P13073 169 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 G0S2P27469 103 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 CDKN2CP42773 168 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 MLF1P58340 268 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 RPL23P62829 140 aaKnown RBP2.87□□□□□ -1.95
SNHG1-217ENST00000541578 NDPQ00604 133 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 REEP5Q00765 189 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 C2orf80Q0P641 193 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 PDK2Q15119 407 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 RNF212Q495C1 297 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 AVPI1Q5T686 147 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 IDNKQ5T6J7 187 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 PLEKHG7Q6ZR37 379 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 PLCZ1Q86YW0 608 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 DAW1Q8N136 415 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 ATPAF2Q8N5M1 289 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 ARIH2OSQ8N7S6 290 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 CYB561A3Q8NBI2 242 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 C11orf72Q8NBR9 251 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 OR8G5Q8NG78 346 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 COQ8AQ8NI60 647 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 GTF2H4Q92759 462 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 LRRC58Q96CX6 371 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 QKIQ96PU8 341 aaKnown RBP eCLIP2.87□□□□□ -1.95
SNHG1-217ENST00000541578 OR2M4Q96R27 311 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 POTEKPQ9BYX7 375 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 C1orf198Q9H425 327 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 HMG20AQ9NP66 347 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 TREX1Q9NSU2 369 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 FGFR1OP2Q9NVK5 253 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 NECAP2Q9NVZ3 263 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 COA4Q9NYJ1 87 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 NXT1Q9UKK6 140 aaKnown RBP2.87□□□□□ -1.95
SNHG1-217ENST00000541578 SLC7A11Q9UPY5 501 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 UTP11Q9Y3A2 253 aaKnown RBP2.87□□□□□ -1.95
SNHG1-217ENST00000541578 KIF25-AS1Q9Y6Z4 181 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 ZGRF1Q86YA3 2104 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 CROCCQ5TZA2 2017 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 MDC1Q14676 2089 aaKnown RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 PDZD2O15018 2839 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 IGLV1-50A0A075B6I6 118 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 A0A0A6YYH2 397 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 IGHV3-64DA0A0J9YX35 117 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 CCDC160A6NGH7 325 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 A6NJ64 397 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF705GA8MUZ8 300 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 C11orf94C9JXX5 98 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 M0QZK8 103 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ANGPTL7O43827 346 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 OXTP01178 125 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 IFNA6P05013 189 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 CDK1P06493 297 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 SERPINA6P08185 405 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 CTXN2P0C2S0 81 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 LINC00614P0C842 121 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 CTSEP14091 401 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF19P17023 458 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 PGAM1P18669 254 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 MAGEA6P43360 314 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 RPS10P46783 165 aaKnown RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 OMPP47874 163 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 PPOXP50336 477 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 LHX2P50458 406 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 UBE2E1P51965 193 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 OR12D2P58182 307 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 SNRPFP62306 86 aaKnown RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 TSPAN31Q12999 210 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 PIGHQ14442 188 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ELOCQ15369 112 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ZNHIT3Q15649 155 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 TOMM34Q15785 309 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 RSPO1Q2MKA7 263 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ACTL10Q5JWF8 245 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 SYT6Q5T7P8 510 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 FBXW9Q5XUX1 488 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 CEMP1Q6PRD7 247 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 UGT2A3Q6UWM9 527 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 Q6ZSR6 202 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 AHSA2Q719I0 299 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF767PQ75MW2 155 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF720Q7Z2F6 126 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 PAGE2Q7Z2X7 111 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 NT5DC3Q86UY8 548 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 GKN2Q86XP6 184 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 CTAGE3PQ8IX95 158 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 SELENOHQ8IZQ5 122 aaKnown RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF786Q8N393 782 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 TMEM35BQ8NCS4 154 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 ATP6V1C2Q8NEY4 427 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 OR1J4Q8NGS1 313 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 NT5CQ8TCD5 201 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 PTX4Q96A99 478 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 TESCQ96BS2 214 aa2.86□□□□□ -1.95
SNHG1-217ENST00000541578 MRPL48Q96GC5 212 aaKnown RBP2.86□□□□□ -1.95
SNHG1-217ENST00000541578 UBE2E2Q96LR5 201 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms