RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 PPIFP30405 207 aaKnown RBP6.95□□□□□ -1.3
USP28-205ENST00000537706 BMI1P35226 326 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 BCAP31P51572 246 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 PSMD7P51665 324 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 IL24Q13007 206 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 KRT74Q7RTS7 529 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 ZNF554Q86TJ5 538 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 SLC35F2Q8IXU6 374 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 RNF133Q8WVZ7 376 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 C4orf36Q96KX1 117 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 GGTLC1Q9BX51 225 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 MFFQ9GZY8 342 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 FAM90A10PA6NDY2 464 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 OR11H12B2RN74 326 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 HSD17B6O14756 317 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 CLEC2LP0C7M8 214 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 MPZP25189 248 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 DEFA1P59665 94 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 DEFA3P59666 94 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 ERVK11-1P61568 191 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 PPP3R1P63098 170 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 ZNF816Q0VGE8 651 aaPredicted RBP6.95□□□□□ -1.3
USP28-205ENST00000537706 DMKNQ6E0U4 476 aaPredicted RBP6.95□□□□□ -1.3
USP28-205ENST00000537706 TMEM91Q6ZNR0 172 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 SSX6Q7RTT6 188 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 WFDC3Q8IUB2 231 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 Q8N6K4 173 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 GVQW1Q8N7I0 195 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 PGLYRP3Q96LB9 341 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 SDHCQ99643 169 aaPredicted RBP6.95□□□□□ -1.3
USP28-205ENST00000537706 SCRT2Q9NQ03 307 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 PARP11Q9NR21 331 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 RHBDL2Q9NX52 303 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 TP53TG1Q9Y2A0 90 aa6.95□□□□□ -1.3
USP28-205ENST00000537706 IGHV3-72A0A0B4J1Y9 119 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 J3QLW9 94 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 SC5DO75845 299 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 CD1AP06126 327 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 ZNF19P17023 458 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 IL3RAP26951 378 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 CD1BP29016 333 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 CDK5R1Q15078 307 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 ZNF79Q15937 498 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 CCDC58Q4VC31 144 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 LINC01590Q5TEZ4 76 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 PYHIN1Q6K0P9 492 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 Q8IYB0 196 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 DRAXINQ8NBI3 349 aaPredicted RBP6.94□□□□□ -1.3
USP28-205ENST00000537706 OR52N4Q8NGI2 321 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 OR9G4Q8NGQ1 327 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 OR6K6Q8NGW6 343 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 SETD6Q8TBK2 473 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 C2CD4CQ8TF44 421 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 EMG1Q92979 244 aaKnown RBP6.94□□□□□ -1.3
USP28-205ENST00000537706 SMIM19Q96E16 107 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 SRRQ9GZT4 340 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 CST11Q9H112 138 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 MIXL1Q9H2W2 232 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 ZCCHC4Q9H5U6 513 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 RANGRFQ9HD47 186 aaPredicted RBP6.94□□□□□ -1.3
USP28-205ENST00000537706 TPSG1Q9NRR2 321 aa6.94□□□□□ -1.3
USP28-205ENST00000537706 IGHV1-3A0A0C4DH29 117 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 E9PI62 339 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 G3V318 75 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 OGG1O15527 345 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 SELENOFO60613 162 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 SERPINA3P01011 423 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 PSKH1P11801 424 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 SOHLH1Q5JUK2 328 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 CLVS2Q5SYC1 327 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 TPRA1Q86W33 373 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 MS4A15Q8N5U1 240 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 TCTEX1D1Q8N7M0 179 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 POC5Q8NA72 575 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 OR8B12Q8NGG6 310 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 OR51L1Q8NGJ5 315 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 OR6N2Q8NGY6 317 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 ACOT12Q8WYK0 555 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 PELI1Q96FA3 418 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 ABHD6Q9BV23 337 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 FBXO7Q9Y3I1 522 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 LOC102724200A0A096LPH7 203 aaPredicted RBP6.93□□□□□ -1.3
USP28-205ENST00000537706 PQLC2LA1A4F0 135 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 SPRY2O43597 315 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 IGHV3-11P01762 117 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 MYL9P24844 172 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 PTBP1P26599 531 aaKnown RBP eCLIP6.93□□□□□ -1.3
USP28-205ENST00000537706 GBX2P52951 348 aaPredicted RBP6.93□□□□□ -1.3
USP28-205ENST00000537706 MRPL28Q13084 256 aaKnown RBP6.93□□□□□ -1.3
USP28-205ENST00000537706 INSL4Q14641 139 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 RBMS2Q15434 407 aaKnown RBP6.93□□□□□ -1.3
USP28-205ENST00000537706 TP53I3Q53FA7 332 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 MZT2AQ6P582 158 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 RPL22L1Q6P5R6 122 aaKnown RBP6.93□□□□□ -1.3
USP28-205ENST00000537706 ANGPTL5Q86XS5 388 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 YIPF7Q8N8F6 280 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 GDPD1Q8N9F7 314 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 ZNF511Q8NB15 262 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 ZNRF4Q8WWF5 429 aa6.93□□□□□ -1.3
USP28-205ENST00000537706 INTS14Q96SY0 518 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms