RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 LRRC18Q8N456 261 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 LY6G5BQ8NDX9 201 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 OR11H6Q8NGC7 330 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 OR51H1Q8NH63 302 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 SCGB1C1Q8TD33 95 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 CD200R1Q8TD46 325 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 APOBEC3DQ96AK3 386 aaPredicted RBP2.91□□□□□ -1.94
SKP1-209ENST00000522552 LYZL4Q96KX0 146 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 GPER1Q99527 375 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 SEC22CQ9BRL7 303 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 PAXXQ9BUH6 204 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 C1orf50Q9BV19 199 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 RSPO3Q9BXY4 272 aaPredicted RBP2.91□□□□□ -1.94
SKP1-209ENST00000522552 ZNF696Q9H7X3 374 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 SCRT2Q9NQ03 307 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 DAZ1Q9NQZ3 744 aaKnown RBP2.91□□□□□ -1.94
SKP1-209ENST00000522552 DAZ3Q9NR90 486 aaKnown RBP2.91□□□□□ -1.94
SKP1-209ENST00000522552 CA10Q9NS85 328 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 MED29Q9NX70 200 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 NUBP2Q9Y5Y2 271 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 PXMP4Q9Y6I8 212 aa2.91□□□□□ -1.94
SKP1-209ENST00000522552 YLPM1P49750 1951 aaKnown RBP2.9□□□□□ -1.94
SKP1-209ENST00000522552 HECW2Q9P2P5 1572 aa2.9□□□□□ -1.94
SKP1-209ENST00000522552 TRAV8-1A0A0A6YYK1 113 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 MRASO14807 208 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 HMGB3O15347 200 aaKnown RBP2.9□□□□□ -1.95
SKP1-209ENST00000522552 ERP29P30040 261 aaKnown RBP2.9□□□□□ -1.95
SKP1-209ENST00000522552 PHBP35232 272 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 AKR1C3P42330 323 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 PPP1CAP62136 330 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 SNRPD2P62316 118 aaKnown RBP2.9□□□□□ -1.95
SKP1-209ENST00000522552 KCNJ8Q15842 424 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 TMEM183BQ1AE95 376 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 ATAD3CQ5T2N8 411 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 C9orf64Q5T6V5 341 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 C5orf46Q6UWT4 87 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 TOMM20LQ6UXN7 152 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 TMEM183AQ8IXX5 376 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 C20orf203Q8NBC4 194 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 OR10G4Q8NGN3 311 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 OR5J2Q8NH18 312 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 RNASE11Q8TAA1 199 aaKnown RBP2.9□□□□□ -1.95
SKP1-209ENST00000522552 GNPDA2Q8TDQ7 276 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 PYURFQ96I23 114 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 DNAJC30Q96LL9 226 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 PFDN5Q99471 154 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 CHAC1Q9BUX1 264 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 GGTLC1Q9BX51 225 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 TBL1XR1Q9BZK7 514 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 SH3BGRL3Q9H299 93 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 OR52D1Q9H346 318 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 LYRM2Q9NU23 88 aaPredicted RBP2.9□□□□□ -1.95
SKP1-209ENST00000522552 DOCK5Q9H7D0 1870 aa2.9□□□□□ -1.95
SKP1-209ENST00000522552 YTHDC2Q9H6S0 1430 aaKnown RBP2.89□□□□□ -1.95
SKP1-209ENST00000522552 SCN10AQ9Y5Y9 1956 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 LOC102724200A0A096LPH7 203 aaPredicted RBP2.89□□□□□ -1.95
SKP1-209ENST00000522552 TMED7-TICAM2A0A0A6YYA0 188 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 TMEM72A0PK05 275 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 KNCNA6PVL3 124 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 C4orf51C9J302 202 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 G3V2T6 193 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 SRSF10O75494 262 aaKnown RBP2.89□□□□□ -1.95
SKP1-209ENST00000522552 HSPB1P04792 205 aaKnown RBP2.89□□□□□ -1.95
SKP1-209ENST00000522552 SERPINE1P05121 402 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 OR56A5P0C7T3 313 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 ORM2P19652 201 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 RBMXP38159 391 aaKnown RBP2.89□□□□□ -1.95
SKP1-209ENST00000522552 CCR6P51684 374 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 HERVK_113P63121 156 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 BTN1A1Q13410 526 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 KLHL12Q53G59 568 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 ZNF613Q6PF04 617 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 DCAF4L2Q8NA75 395 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 LINC01555Q8NAE3 123 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 KLHL30-AS1Q8NEE0 82 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 ZNF555Q8NEP9 628 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 OR2M3Q8NG83 312 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 OR8J3Q8NGG0 315 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 OR2T27Q8NH04 317 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 OR1L1Q8NH94 360 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 CT55Q8WUE5 264 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 TMEM101Q96IK0 257 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 EFCAB11Q9BUY7 163 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 TMEM147Q9BVK8 224 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 TMEM222Q9H0R3 208 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 NOX3Q9HBY0 568 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 ZNF331Q9NQX6 463 aaPredicted RBP2.89□□□□□ -1.95
SKP1-209ENST00000522552 SPANXA1Q9NS26 97 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 JPT1Q9UK76 154 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 ANAPC10Q9UM13 185 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 ASB4Q9Y574 426 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 DOCK6Q96HP0 2047 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 TRIP11Q15643 1979 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 MIA2Q96PC5 1412 aa2.89□□□□□ -1.95
SKP1-209ENST00000522552 A0A1W2PPR1 153 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 OR5H1A6NKK0 313 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 RFPL4AA6NLU0 287 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 IFITM10A6NMD0 228 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 RFPL4AL1F8VTS6 287 aa2.88□□□□□ -1.95
SKP1-209ENST00000522552 SLC17A3O00476 420 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms