RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SOCS1O15524 211 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 RGS11O94810 467 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 PF4V1P10720 104 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 CALRP27797 417 aaKnown RBP13.46□□□□□ -0.25
SQLE-205ENST00000521232 PPP1CCP36873 323 aaKnown RBP13.46□□□□□ -0.25
SQLE-205ENST00000521232 PSMD7P51665 324 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 P2RY14Q15391 338 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 Q6ZPA2 131 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 ZNF367Q7RTV3 350 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 FOXRED2Q8IWF2 684 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 SVOPQ8N4V2 548 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 S1PR3Q99500 378 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 RIMS4Q9H426 269 aaPredicted RBP13.46□□□□□ -0.25
SQLE-205ENST00000521232 ABRACLQ9P1F3 81 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 LINC00527Q9UJ94 153 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 HSF4Q9ULV5 492 aa13.46□□□□□ -0.25
SQLE-205ENST00000521232 RANBP1P43487 201 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 GPR12P47775 334 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 F2RL1P55085 397 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 TMEM50BP56557 158 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 LSAMPQ13449 338 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 RAB11BQ15907 218 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 SSX1Q16384 188 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 C2orf76Q3KRA6 126 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 STPG2Q8N412 459 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 OR51D1Q8NGF3 324 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 ZFP57Q9NU63 452 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 V9GY05 133 aa13.45□□□□□ -0.26
SQLE-205ENST00000521232 AP4M1O00189 453 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 MRPS14O60783 128 aaKnown RBP13.44□□□□□ -0.26
SQLE-205ENST00000521232 ATP6V1G2O95670 118 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 CD33P20138 364 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 SLC35B1P78383 322 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 ZNF833PQ6ZTB9 187 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 MOB1BQ7L9L4 216 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 FAM71E2Q8N5Q1 922 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 COMMD1Q8N668 190 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 FAM3DQ96BQ1 224 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 RASL11BQ9BPW5 248 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 CHMP1AQ9HD42 196 aaPredicted RBP13.44□□□□□ -0.26
SQLE-205ENST00000521232 AK3Q9UIJ7 227 aa13.44□□□□□ -0.26
SQLE-205ENST00000521232 TRAV1-2A0A0B4J238 106 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 LDLRAD4O15165 306 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 PF4P02776 101 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 CLDN12P56749 244 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 RPL23AP62750 156 aaKnown RBP13.43□□□□□ -0.26
SQLE-205ENST00000521232 KHDC1LQ5JSQ8 128 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 CD200R1LQ6Q8B3 271 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 REC114Q7Z4M0 266 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 OR2AK2Q8NG84 335 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 IL1F10Q8WWZ1 152 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 RBMXL1Q96E39 390 aaKnown RBP13.43□□□□□ -0.26
SQLE-205ENST00000521232 NABP2Q9BQ15 211 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 STEAP1Q9UHE8 339 aa13.43□□□□□ -0.26
SQLE-205ENST00000521232 IGLL1P15814 213 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 SLC6A1P30531 599 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 OR3A3P47888 321 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 VEGFCP49767 419 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 GABARAPL2P60520 117 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 PNLIPRP3Q17RR3 467 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 TEX38Q6PEX7 206 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 SETD6Q8TBK2 473 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 PHF21AQ96BD5 680 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 ARHGAP5-AS1Q96IT6 56 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 HDHD3Q9BSH5 251 aaPredicted RBP13.42□□□□□ -0.26
SQLE-205ENST00000521232 GON7Q9BXV9 100 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 MRPL20Q9BYC9 149 aaKnown RBP13.42□□□□□ -0.26
SQLE-205ENST00000521232 IFI27L2Q9H2X8 130 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 NDUFB11Q9NX14 153 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 MGAT4AQ9UM21 535 aa13.42□□□□□ -0.26
SQLE-205ENST00000521232 SAA2-SAA4A0A096LPE2 208 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 TRDV1A0A1B0GX56 115 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 SHISA3A0PJX4 238 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 ITGB1BP1O14713 200 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 PDCD5O14737 125 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 DENRO43583 198 aaKnown RBP13.41□□□□□ -0.26
SQLE-205ENST00000521232 PRB2P02812 416 aaPredicted RBP13.41□□□□□ -0.26
SQLE-205ENST00000521232 SAA2P0DJI9 122 aaPredicted RBP13.41□□□□□ -0.26
SQLE-205ENST00000521232 GALP22466 123 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 SOX6P35712 828 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 FAM71F2Q6NXP2 309 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 OR56B1Q8NGI3 324 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 RITA1Q96K30 269 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 HSPB9Q9BQS6 159 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 ZNF251Q9BRH9 671 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 PECRQ9BY49 303 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 GHITMQ9H3K2 345 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 Q9N2K0 584 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 NECAP2Q9NVZ3 263 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 PIPOXQ9P0Z9 390 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 SLC23A1Q9UHI7 598 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 RAB22AQ9UL26 194 aa13.41□□□□□ -0.26
SQLE-205ENST00000521232 TMEM272A0A1B0GTI8 110 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 RAB29O14966 203 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 ST8SIA5O15466 376 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 IGF1P05019 195 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 ACTBP60709 375 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 PLAC9Q5JTB6 97 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 HES5Q5TA89 166 aa13.4□□□□□ -0.26
SQLE-205ENST00000521232 FOXB2Q5VYV0 432 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms