RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 LRRN1Q6UXK5 716 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 DOLPP1Q86YN1 238 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 NATD1Q8N6N6 113 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR51B6Q9H340 312 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 UBAP1Q9NZ09 502 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 U3KQK5 164 aa2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 URB2Q14146 1524 aaKnown RBP2.88□□□□□ -1.95
HMGB1P47-201ENST00000511281 SPATA31E1Q6ZUB1 1445 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 SSH2Q76I76 1423 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 CHD2O14647 1828 aaKnown RBP2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 A0A0B4J2C4 111 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 A0A1B0GU33 70 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 C21orf140B9A014 251 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 D6RAR5 112 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 LECT2O14960 151 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 PFDN6O15212 129 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 HLA-DRAP01903 254 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 CDK2P24941 298 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 HSPA9P38646 679 aaKnown RBP2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 SULT1A2P50226 295 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR8G1Q15617 311 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 CST9Q5W186 159 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 AMMECR1LQ6DCA0 310 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 LRP11Q86VZ4 500 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 ZFAND2AQ8N6M9 145 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 Q8NAQ8 132 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR11G2Q8NGC1 345 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR8J2Q8NGG1 315 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 CD200R1Q8TD46 325 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 C8orf76Q96K31 380 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 EBNA1BP2Q99848 306 aaKnown RBP2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 CDCA4Q9BXL8 241 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 BCL2L14Q9BZR8 327 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 EIF5A2Q9GZV4 153 aaKnown RBP2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 UCK1Q9HA47 277 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 FGFR1OP2Q9NVK5 253 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 BABAM2Q9NXR7 383 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR51B4Q9Y5P0 310 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 CFTRP13569 1480 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 NID2Q14112 1375 aa2.87□□□□□ -1.95
HMGB1P47-201ENST00000511281 PLB1Q6P1J6 1458 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 A6NED7 52 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 CPSF4O95639 269 aaKnown RBP2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 TYMSP04818 313 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 OPRM1P35372 400 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR1E2P47887 323 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 BLVRAP53004 296 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 LINC00313P59037 77 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 MYL6P60660 151 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 SNAP25P60880 206 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 CXCR4P61073 352 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 FGF12P61328 243 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 PDGFRLQ15198 375 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 SPIN4Q56A73 249 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 ACSBG2Q5FVE4 666 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 C10orf67Q8IYJ2 551 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 ZNF721Q8TF20 911 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 PTH2Q96A98 100 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 C1QTNF6Q9BXI9 259 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 PARD6GQ9BYG4 376 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 DERL2Q9GZP9 239 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 MAP1LC3AQ9H492 121 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 DUSP21Q9H596 190 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 KCNIP2Q9NS61 270 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 SLC23A2Q9UGH3 650 aa2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 MRPS16Q9Y3D3 137 aaKnown RBP2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 POLR3HQ9Y535 204 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 TOP2AP11388 1531 aaKnown RBP2.86□□□□□ -1.95
HMGB1P47-201ENST00000511281 SHROOM3Q8TF72 1996 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 GGTLC3B5MD39 225 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 CD5P06127 495 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR13C7P0DN81 318 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 CXCL2P19875 107 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 PRPS1L1P21108 318 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 RPS24P62847 133 aaKnown RBP2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 HPCAP84074 193 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 TMEM267Q0VDI3 215 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 MAPK14Q16539 360 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 IMPG1Q17R60 797 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 WDR59Q6PJI9 974 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 CD200R1LQ6Q8B3 271 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 TMBIM1Q969X1 311 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 TIPINQ9BVW5 301 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 MED28Q9H204 178 aa2.85□□□□□ -1.95
HMGB1P47-201ENST00000511281 CCDC88BA6NC98 1476 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 CACNA1DQ01668 2161 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 ISG15P05161 165 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 SERPINA6P08185 405 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 OR12D1P0DN82 309 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 IGHV3-30-3P0DP02 117 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 RNASE2P10153 161 aaKnown RBP2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 HRES1P13985 223 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 CXCL3P19876 107 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 CRABP2P29373 138 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 DDTP30046 118 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 NKX2-5P52952 324 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 FABP5Q01469 135 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 APOFQ13790 326 aa2.84□□□□□ -1.95
HMGB1P47-201ENST00000511281 PDK2Q15119 407 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms